| ID | SAVERM_2776
| Type | CDS
|
| From | 3405295
| nt length | 1368
|
| To | 3406662
| aa length | 455
|
| Gene | sdaA
| pI | 5.53
|
| Definition | putative L-serine dehydratase
| M.W (Da) | 48486
|
| Note | PF03313: Serine dehydratase alpha chain
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5469 L-serine dehydratase | 853 | 0.0e+00
|
| sgr | SGR_2048 putative L-serine dehydratase | 803 | 0.0e+00
|
| sam | SAM23877_5206 L-serine deaminase I | 840 | 0.0e+00
|
| scab | SCAB27501 putative L-serine dehydratase | 854 | 0.0e+00
|
| sace | SACE_6377 L-serine dehydratase | 636 | 0.0e+00
|
| mtub | gi|15607211 PROBABLE L-SERINE DEHYDRATASE SDAA (L-SERINE DEAMINASE) (SDH) (L-SD) [Mycobacterium tuberculosis H37Rv] | 487 | 5.8e-139
|
| cglu | gi|19552857 COG1760:L-serine deaminase [Corynebacterium glutamicum] | 392 | 2.3e-110
|
| bsub | BG13398 sdaAA, ylpA; L-serine dehydratase alpha subunit [EC:4.2.1.13] | 177 | 8.6e-46
|
| ecoli | gi|16129768 L-serine deaminase [Escherichia coli K12] | 476 | 1.3e-135
|
| paer | PA2443 [gene=sdaA] [prot=L-serine dehydratase] [comment=PA2443] | 609 | 1.4e-175
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| SDH_alpha | 1 | Serine dehydratase alpha chain | 188-449 | 345.4 | 2.2e-103
|
| SDH_beta | 1 | Serine dehydratase beta chain | 4-157 | 206.6 | 2.4e-61
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1235 | Seems to have no N-terminal signal seq.
|