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IDSAVERM_2798 TypeCDS
From3433035 nt length855
To3433889 aa length284
Gene pI6.45
Definitionputative DNA-binding protein M.W (Da)31914
NotePF01381: Helix-turn-helix AseI frg.K
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_3948 putative DNA-binding protein2653.0e-89
paerPA1879 [gene=PA1879] [prot=hypothetical protein] [comment=PA1879]323.8e-02

*sgr, Streptomyces griseus IFO13350; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain13-7645.09.8e-12

HTH_31Helix-turn-helix18-6634.11.9e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497398.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14880.0e+00
WP_033328314.1 helix-turn-helix transcriptional regulator [Streptomyces yer... 13300.0e+00
NGO10369.1 helix-turn-helix domain-containing protein [Streptomyces scabiche... 13240.0e+00
WP_206439883.1 helix-turn-helix domain-containing protein [Streptomyces sca... 13210.0e+00
WP_124438834.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13060.0e+00
WP_095750686.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12901.1e-178
WP_055513890.1 helix-turn-helix domain-containing protein [Streptomyces aur... 12874.1e-178
WP_159326974.1 helix-turn-helix transcriptional regulator [Streptomyces ten... 12171.3e-167
WP_121717546.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 12083.2e-166
WP_164419608.1 helix-turn-helix transcriptional regulator [Streptomyces coe... 12083.5e-166

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3677 Seems to have no N-terminal signal seq.