| ID | SAVERM_2834
| Type | CDS
|
| From | 3480273
| nt length | 435
|
| To | 3479839
| aa length | 144
|
| Gene |
| pI | 4.78
|
| Definition | putative MarR-family transcriptional regulator
| M.W (Da) | 15701
|
| Note | PF01047: MarR family
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5413 undefined product | 267 | 4.0e-94
|
| sgr | SGR_2122 putative MarR-family transcriptional regulator | 262 | 2.0e-92
|
| sam | SAM23877_5159 MarR-transcriptional regulator | 261 | 1.0e-91
|
| scab | SCAB28331 putative MarR-family transcriptional regulator | 273 | 1.0e-96
|
| sace | SACE_6221 MarR-transcriptional regulator | 142 | 8.0e-45
|
| nfar | nfa10440 transcriptional regulator | 134 | 2.4e-33
|
| mtub | gi|15607877 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN [Mycobacterium tuberculosis H37Rv] | 119 | 6.3e-29
|
| bsub | BG13003 yhbI; similar to transcriptional regulator (MarR family) | 50 | 3.1e-08
|
| paer | PA0253 [gene=PA0253] [prot=probable transcriptional regulator] [comment=PA0253] | 47 | 5.2e-07
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MarR_2 | 1 | MarR family | 28-89 | 45.6 | 4.4e-12
|
| MarR | 1 | MarR family | 37-88 | 45.1 | 6.3e-12
|
| HTH_27 | 1 | Winged helix DNA-binding domain | 37-98 | 30.3 | 4e-07
|
| Fe_dep_repress | 1 | Iron dependent repressor, N-terminal DNA binding domain | 52-82 | 22.5 | 8.8e-05
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_211180164.1 | MarR family transcriptional regulator [Streptomyces sp. RLA2...
| 729 | 1.1e-97 |
| WP_103550933.1 | MarR family transcriptional regulator [Streptomyces populi] ...
| 730 | 1.5e-97 |
| WP_095852549.1 | MULTISPECIES: MarR family transcriptional regulator [Strepto...
| 728 | 2.7e-97 |
| WP_054233186.1 | MULTISPECIES: MarR family transcriptional regulator [Strepto...
| 727 | 4.2e-97 |
| WP_189773407.1 | MarR family transcriptional regulator [Streptomyces tauricus...
| 726 | 5.2e-97 |
| WP_181650017.1 | MarR family transcriptional regulator [Streptomyces sp. WAC0...
| 726 | 6.9e-97 |
| WP_151472255.1 | MarR family transcriptional regulator [Streptomyces triticir...
| 726 | 7.1e-97 |
| WP_037626136.1 | MarR family transcriptional regulator [Streptomyces aureus]
| 725 | 9.2e-97 |
| WP_210889746.1 | MarR family transcriptional regulator [Streptomyces sp. BH-S...
| 724 | 1.2e-96 |
| WP_107021259.1 | MarR family transcriptional regulator [Streptomyces dioscori...
| 723 | 1.7e-96 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0737 | Seems to have no N-terminal signal seq.
|