| ID | SAVERM_2879
| Type | CDS
|
| From | 3525327
| nt length | 453
|
| To | 3524875
| aa length | 150
|
| Gene |
| pI | 8.48
|
| Definition | putative membrane protein
| M.W (Da) | 16593
|
| Note |
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5375 putative secreted/membrane protein | 254 | 5.0e-89
|
| sgr | SGR_2161 putative secreted/membrane protein | 246 | 8.0e-86
|
| sam | SAM23877_5121 Secreted protein | 281 | 8.0e-100
|
| scab | SCAB28741 hypothetical protein | 270 | 3.0e-95
|
| sace | SACE_6278 secreted protein | 98 | 6.0e-28
|
| nfar | nfa10670 hypothetical protein | 71 | 3.5e-14
|
| mtub | gi|15608452 CONSERVED HYPOTHETICAL SECRETED PROTEIN [Mycobacterium tuberculosis H37Rv] | 87 | 4.8e-19
|
| cglu | gi|19552437 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 62 | 9.1e-12
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF2550 | 1 | Protein of unknown function (DUF2550) | 14-144 | 154.2 | 1.5e-45
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189189171.1 | DUF2550 domain-containing protein [Streptomyces albiflavesce...
| 605 | 1.2e-78 |
| WP_028804232.1 | DUF2550 domain-containing protein [Streptomyces sp. 142MFCol...
| 604 | 1.5e-78 |
| WP_095936681.1 | DUF2550 domain-containing protein [Streptomyces sp. Tue6028]...
| 601 | 4.3e-78 |
| WP_215211547.1 | MULTISPECIES: DUF2550 family protein [unclassified Streptomy...
| 600 | 7.3e-78 |
| WP_033275517.1 | MULTISPECIES: DUF2550 domain-containing protein [Streptomyce...
| 598 | 1.1e-77 |
| SCD33730.1 | Protein of unknown function [Streptomyces sp. di50b] >emb
| 598 | 1.1e-77 |
| WP_099499945.1 | MULTISPECIES: DUF2550 domain-containing protein [Streptomyce...
| 598 | 1.3e-77 |
| WP_081219456.1 | MULTISPECIES: DUF2550 domain-containing protein [unclassifie...
| 598 | 1.3e-77 |
| WP_059130016.1 | MULTISPECIES: DUF2550 domain-containing protein [unclassifie...
| 597 | 1.6e-77 |
| WP_031020613.1 | MULTISPECIES: DUF2550 domain-containing protein [Streptomyce...
| 596 | 2.2e-77 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.6222 | Seems to have an uncleavable N-term signal seq
|