| ID | SAVERM_2883
| Type | CDS
|
| From | 3529909
| nt length | 1590
|
| To | 3528320
| aa length | 529
|
| Gene | atpA
| pI | 4.79
|
| Definition | putative F-type proton-transporting ATPase alpha chain
| M.W (Da) | 57265
|
| Note | PF00006: ATP synthase alpha/beta family, nucleotide-binding domain
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5371 atpA ATP synthase alpha chain | 1030 | 0.0e+00
|
| sgr | SGR_2165 putative ATP synthase alpha chain | 978 | 0.0e+00
|
| sam | SAM23877_5117 F1 sector of membrane-bound ATP synthase, alpha subunit | 1024 | 0.0e+00
|
| scab | SCAB28781 putative F-type proton-transporting ATPase alpha chain | 1029 | 0.0e+00
|
| sace | SACE_6282 ATP synthase alpha chain | 767 | 0.0e+00
|
| nfar | nfa10630 atpA ATP synthase alpha subunit | 723 | 0.0e+00
|
| mtub | gi|15608448 ATP synthase subunit A [Mycobacterium tuberculosis H37Rv] | 738 | 0.0e+00
|
| cglu | gi|19552433 COG0056:F0F1-type ATP synthase alpha subunit [Corynebacterium glutamicum] | 692 | 0.0e+00
|
| bsub | BG10819 atpA; ATP synthase alpha chain [EC:3.6.1.34] | 576 | 9.9e-166
|
| ecoli | gi|16131602 ATP synthase subunit A [Escherichia coli K12] | 487 | 9.0e-139
|
| paer | PA5556 [gene=atpA] [prot=ATP synthase alpha chain] [comment=PA5556] | 512 | 2.8e-146
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ATP-synt_ab | 1 | ATP synthase alpha/beta family, nucleotide-binding domain | 153-376 | 224.2 | 1.3e-66
|
| ATP-synt_ab_C | 1 | ATP synthase alpha/beta chain, C terminal domain | 383-508 | 158.4 | 9.5e-47
|
| ATP-synt_ab_N | 1 | ATP synthase alpha/beta family, beta-barrel domain | 30-96 | 55.7 | 5e-15
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_095936677.1 | F0F1 ATP synthase subunit alpha [Streptomyces sp. Tue6028] >...
| 2657 | 0.0e+00 |
| WP_028804228.1 | F0F1 ATP synthase subunit alpha [Streptomyces sp. 142MFCol3....
| 2654 | 0.0e+00 |
| WP_152892827.1 | F0F1 ATP synthase subunit alpha [Streptomyces adustus] >gb
| 2638 | 0.0e+00 |
| WP_126395088.1 | F0F1 ATP synthase subunit alpha [Streptomyces cyaneochromoge...
| 2638 | 0.0e+00 |
| WP_126900119.1 | F0F1 ATP synthase subunit alpha [Streptomyces sp. WAC 01325]...
| 2634 | 0.0e+00 |
| WP_189189175.1 | F0F1 ATP synthase subunit alpha [Streptomyces albiflavescens...
| 2633 | 0.0e+00 |
| WP_058923148.1 | F0F1 ATP synthase subunit alpha [Streptomyces sp. CdTB01] >g...
| 2632 | 0.0e+00 |
| WP_148010483.1 | F0F1 ATP synthase subunit alpha [Streptomyces sp. me109] >lc...
| 2632 | 0.0e+00 |
| WP_123991664.1 | F0F1 ATP synthase subunit alpha [Streptomyces sp. A2-16] >gb...
| 2631 | 0.0e+00 |
| WP_168530267.1 | F0F1 ATP synthase subunit alpha [Streptomyces sp. RPA4-2] >g...
| 2631 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3408 | Seems to have no N-terminal signal seq.
|