| ID | SAVERM_2886
| Type | CDS
|
| From | 3531681
| nt length | 243
|
| To | 3531439
| aa length | 80
|
| Gene | atpE
| pI | 6.35
|
| Definition | putative F-type proton-transporting ATPase c chain
| M.W (Da) | 8011
|
| Note | PF00137: ATP synthase subunit C
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5368 atpE ATP synthase C chain | 118 | 1.0e-37
|
| sgr | SGR_2168 putative ATP synthase C chain | 76 | 8.0e-21
|
| sam | SAM23877_5114 ATP synthase subunit c | 117 | 2.0e-37
|
| scab | SCAB28811 putative F-type proton-transporting ATPase c chain | 121 | 8.0e-39
|
| sace | SACE_6285 ATP synthase C chain | 68 | 8.0e-18
|
| nfar | nfa10600 atpE ATP synthase C subunit | 86 | 2.9e-19
|
| mtub | gi|15608445 ATP synthase subunit C [Mycobacterium tuberculosis H37Rv] | 29 | 3.9e-02
|
| cglu | gi|19552430 COG0636:F0F1-type ATP synthase c subunit/Archaeal/vacuolar-type H+-ATPase subunit K [Corynebacterium glutamicum] | 80 | 1.1e-17
|
| bsub | BG10816 atpE; ATP synthase c chain [EC:3.6.1.34] | 51 | 5.3e-09
|
| ecoli | gi|16131605 ATP synthase subunit C [Escherichia coli K12] | 42 | 6.1e-06
|
| paer | PA5559 [gene=atpE] [prot=atp synthase C chain] [comment=PA5559] | 36 | 3.6e-04
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ATP-synt_C | 1 | ATP synthase subunit C | 19-77 | 41.8 | 9.5e-11
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4397 | Seems to have a cleavable N-term signal seq.
|