| ID | SAVERM_291
| Type | CDS
|
| From | 341939
| nt length | 2121
|
| To | 339819
| aa length | 706
|
| Gene |
| pI | 11.45
|
| Definition | putative IS30 family ISLxx5-like transposase
| M.W (Da) | 78342
|
| Note | IS30 family (339207..342900) Inverted repeat sequence (13/17 bp).
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transposon & IS
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6393 putative transposase | 458 | 7.0e-156
|
| sgr | SGR_6978 putative transposase | 441 | 1.0e-149
|
| scab | SCAB60181 putative transposase | 248 | 1.0e-75
|
| sace | SACE_5091 transposase | 450 | 2.0e-154
|
| mtub | gi|15610327 PROBABLE TRANSPOSASE [Mycobacterium tuberculosis H37Rv] | 180 | 2.5e-46
|
| cglu | gi|19554036 COG2826:Transposase, IS30 family [Corynebacterium glutamicum] | 204 | 8.6e-54
|
| ecoli | gi|16128241 CP4-6 prophage; transposase1 for IS30 [Escherichia coli K12] | 180 | 3.2e-46
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| rve | 1 | Integrase core domain | 105-201 | 81.8 | 3.8e-23
|
| HTH_38 | 1 | Helix-turn-helix domain | 372-415 | 66.5 | 1.2e-18
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1525 | Seems to have no N-terminal signal seq.
|