| ID | SAVERM_2913
| Type | CDS
|
| From | 3644642
| nt length | 222
|
| To | 3644421
| aa length | 73
|
| Gene | rpmE2
| pI | 9.41
|
| Definition | putative ribosomal protein L31
| M.W (Da) | 7974
|
| Note | PF01197: Ribosomal protein L31
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5359 50S ribosomal protein L31 | 144 | 7.0e-48
|
| sgr | SGR_2177 putative 50S ribosomal protein L31 | 140 | 1.0e-46
|
| sam | SAM23877_5104 50S ribosomal subunit protein L31 | 145 | 2.0e-48
|
| scab | SCAB28901 putative ribosomal protein L31 | 147 | 5.0e-49
|
| sace | SACE_6293 50S ribosomal protein L31 | 112 | 1.0e-35
|
| nfar | nfa10530 rpmE2 ribosomal protein L31 | 110 | 2.5e-26
|
| mtub | gi|15608438 50S ribosomal protein L31 [Mycobacterium tuberculosis H37Rv] | 103 | 2.9e-24
|
| bsub | BG10417 rpmE; 50S ribosomal protein L31 | 72 | 3.0e-15
|
| ecoli | gi|16131774 50S ribosomal subunit protein L31 [Escherichia coli K12] | 77 | 1.7e-16
|
| paer | PA5049 [gene=rpmE] [prot=50S ribosomal protein L31] [comment=PA5049] | 90 | 1.7e-20
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_L31 | 1 | Ribosomal protein L31 | 1-66 | 105.5 | 1.1e-30
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_030574381.1 | MULTISPECIES: 50S ribosomal protein L31 [Streptomyces] >dbj
| 378 | 1.5e-46 |
| WP_125515112.1 | MULTISPECIES: 50S ribosomal protein L31 [unclassified Strept...
| 377 | 2.9e-46 |
| WP_100595864.1 | MULTISPECIES: 50S ribosomal protein L31 [Streptomyces] >gb
| 376 | 3.4e-46 |
| WP_188336862.1 | 50S ribosomal protein L31 [Streptomyces xanthii] >gb
| 376 | 3.9e-46 |
| WP_033323852.1 | MULTISPECIES: 50S ribosomal protein L31 [Streptomyces] >gb
| 376 | 4.0e-46 |
| WP_165340670.1 | 50S ribosomal protein L31 [Streptomyces ureilyticus] >gb
| 375 | 4.8e-46 |
| WP_030792109.1 | MULTISPECIES: 50S ribosomal protein L31 [Streptomyces] >gb
| 375 | 5.1e-46 |
| WP_006142443.1 | MULTISPECIES: 50S ribosomal protein L31 [Streptomyces] >gb
| 374 | 6.2e-46 |
| WP_018535357.1 | MULTISPECIES: 50S ribosomal protein L31 [unclassified Strept...
| 374 | 6.6e-46 |
| WP_028804216.1 | MULTISPECIES: 50S ribosomal protein L31 [Streptomyces] >lcl
| 374 | 7.2e-46 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2063 | Seems to have no N-terminal signal seq.
|