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IDSAVERM_2923 TypeCDS
From3659339 nt length1530
To3657810 aa length509
Gene pI4.46
Definitionputative integrin-like protein M.W (Da)51369
NotePF01839: FG-GAP repeat AseI frg.K
SignalP v.4.0Signal peptide | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB2591 putative integrin-like protein9090.0e+00

*scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FG-GAP3FG-GAP repeat74-104, 364-400, 437-471126.52.5e-37

VCBS1Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella145-20475.24e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_093474744.1 MULTISPECIES: FG-GAP and VCBS repeat-containing protein [unc... 21410.0e+00
WP_079058724.1 FG-GAP and VCBS repeat-containing protein [Streptomyces ossa... 21340.0e+00
WP_138906511.1 FG-GAP-like repeat-containing protein [Streptomyces chryseus... 21160.0e+00
WP_138897821.1 FG-GAP and VCBS repeat-containing protein [Streptomyces chry... 21020.0e+00
CBG67471.1 hypothetical protein (fragment) [Streptomyces scabiei 87.22] 20880.0e+00
WP_060877655.1 MULTISPECIES: FG-GAP and VCBS repeat-containing protein [Str... 20830.0e+00
KFG10055.1 hypothetical protein IQ61_04945 [Streptomyces scabiei] 20810.0e+00
WP_107466085.1 FG-GAP and VCBS repeat-containing protein [Streptomyces sp. ... 20800.0e+00
WP_079054949.1 FG-GAP and VCBS repeat-containing protein [Streptomyces neya... 20740.0e+00
WP_099964240.1 FG-GAP and VCBS repeat-containing protein [Streptomyces sp. ... 20690.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.2466 Seems to have no N-terminal signal seq.