| ID | SAVERM_2983
| Type | CDS
|
| From | 3740309
| nt length | 939
|
| To | 3741247
| aa length | 312
|
| Gene | aotM
| pI | 9.56
|
| Definition | putative arginine/ornithine ABC transport permease
| M.W (Da) | 34315
|
| Note | gltK, PF00528: Binding-protein-dependent transport system inner membrane component
| AseI frg. | N
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5259 atrB permease | 509 | 0.0e+00
|
| sgr | SGR_2238 putative arginine/ornithine ABC transporter permease protein | 405 | 9.0e-144
|
| sam | SAM23877_5047 ABC-type amino acid transport system, permease component | 536 | 0.0e+00
|
| scab | SCAB29891 putative arginine/ornithine ABC transport permease | 501 | 0.0e+00
|
| nfar | nfa18900 ABC transporter permease | 262 | 3.3e-71
|
| cglu | gi|19552549 COG0765:ABC-type amino acid transport system, permease component [Corynebacterium glutamicum] | 280 | 6.2e-77
|
| bsub | BG11186 yckJ; polar amino acid transport system permease protein | 136 | 1.4e-33
|
| ecoli | gi|16129865 putative amino acid transport protein (ABC superfamily, membrane) [Escherichia coli K12] | 139 | 3.2e-34
|
| paer | PA0890 [gene=aotM] [prot=arginine/ornithine transport protein AotM] [comment=PA0890] | 124 | 8.5e-30
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| BPD_transp_1 | 1 | Binding-protein-dependent transport system inner membrane component | 87-279 | 77.1 | 1.3e-21
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_067368770.1 | amino acid ABC transporter permease [Streptomyces olivochrom...
| 1261 | 2.3e-173 |
| WP_189902238.1 | amino acid ABC transporter permease [Streptomyces spiralis] ...
| 1255 | 2.4e-172 |
| WP_030170437.1 | amino acid ABC transporter permease [Streptomyces sp. NRRL S...
| 1253 | 4.6e-172 |
| WP_234514192.1 | amino acid ABC transporter permease [Streptomyces glomeratus...
| 1250 | 1.0e-171 |
| WP_030741254.1 | amino acid ABC transporter permease [Streptomyces sp. NRRL S...
| 1248 | 2.2e-171 |
| WP_189189295.1 | amino acid ABC transporter permease [Streptomyces albiflaves...
| 1242 | 2.3e-170 |
| WP_055610358.1 | amino acid ABC transporter permease [Streptomyces phaeochrom...
| 1241 | 3.0e-170 |
| WP_210889861.1 | amino acid ABC transporter permease [Streptomyces sp. BH-SS-...
| 1240 | 3.9e-170 |
| WP_200395909.1 | amino acid ABC transporter permease [Streptomyces sp. ZYC-3]...
| 1240 | 4.1e-170 |
| WP_141312038.1 | amino acid ABC transporter permease [Streptomyces spinoverru...
| 1240 | 4.6e-170 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5670 | Seems to have no N-terminal signal seq.
|