| ID | SAVERM_3016
| Type | CDS
|
| From | 3771438
| nt length | 258
|
| To | 3771695
| aa length | 85
|
| Gene | wblE
| pI | 7.13
|
| Definition | putative WhiB-family transcriptional regulator; putative role in cell cycle control
| M.W (Da) | 9671
|
| Note | PF02467: Transcription factor WhiB
| AseI frg. | N
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5240 putative WhiB-family transcriptional regulator | 140 | 5.0e-46
|
| sgr | SGR_2274 putative WhiB-family transcriptional regulator | 142 | 4.0e-47
|
| sam | SAM23877_5029 Transcriptional regulator WhiB1 | 140 | 5.0e-46
|
| scab | SCAB30131 putative WhiB-family transcriptional regulator; putative role in cell cycle control | 141 | 2.0e-46
|
| sace | SACE_6426 putative transcriptional regulator (WhiB family) | 146 | 2.0e-48
|
| nfar | nfa45800 transcriptional regulator | 139 | 2.9e-35
|
| mtub | gi|15610355 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB1 [Mycobacterium tuberculosis H37Rv] | 141 | 9.4e-36
|
| cglu | gi|19551994 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 141 | 5.1e-36
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Whib | 1 | Transcription factor WhiB | 3-71 | 96.2 | 1.2e-27
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_114059083.1 | WhiB family transcriptional regulator [Streptomyces globosus...
| 361 | 1.8e-43 |
| WP_027747983.1 | MULTISPECIES: WhiB family transcriptional regulator [Strepto...
| 360 | 2.4e-43 |
| WP_023528300.1 | MULTISPECIES: WhiB family transcriptional regulator [Strepto...
| 360 | 2.4e-43 |
| WP_028427873.1 | MULTISPECIES: WhiB family transcriptional regulator [Strepto...
| 360 | 2.7e-43 |
| WP_103503164.1 | MULTISPECIES: WhiB family transcriptional regulator [Strepto...
| 359 | 3.0e-43 |
| WP_006380970.1 | MULTISPECIES: WhiB family transcriptional regulator [Strepto...
| 359 | 3.1e-43 |
| WP_101421667.1 | WhiB family transcriptional regulator [Streptomyces sp. CMB-...
| 359 | 3.1e-43 |
| WP_016639615.1 | MULTISPECIES: WhiB family transcriptional regulator [Strepto...
| 359 | 3.1e-43 |
| WP_004937597.1 | MULTISPECIES: WhiB family transcriptional regulator [Strepto...
| 359 | 3.1e-43 |
| WP_201871350.1 | WhiB family transcriptional regulator [Streptomyces coffeae]...
| 359 | 3.3e-43 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3698 | Seems to have no N-terminal signal seq.
|