| ID | SAVERM_3020
| Type | CDS
|
| From | 3777305
| nt length | 843
|
| To | 3776463
| aa length | 280
|
| Gene | dasC1
| pI | 9.97
|
| Definition | putative multiple sugar ABC transporter permease protein
| M.W (Da) | 30455
|
| Note | malG, PF00528: Binding-protein-dependent transport system inner membrane component
| AseI frg. | N
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5234 putative sugar transporter integral membrane protein | 247 | 2.0e-82
|
| sgr | SGR_2279 putative sugar ABC transporter permease protein | 273 | 1.0e-92
|
| sam | SAM23877_5022 Maltose/maltodextrin ABC transporter, permease protein MalG | 249 | 2.0e-83
|
| scab | SCAB30171 putative multiple sugar ABC transporter permease protein | 494 | 7.0e-180
|
| sace | SACE_1047 ABC sugar transporter, permease component | 176 | 7.0e-55
|
| nfar | nfa55480 transporter | 176 | 1.6e-45
|
| mtub | gi|15608377 PROBABLE SUGAR-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER SUGB [Mycobacterium tuberculosis H37Rv] | 175 | 2.7e-45
|
| cglu | gi|19551953 COG0395:Sugar permeases [Corynebacterium glutamicum] | 183 | 6.9e-48
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| BPD_transp_1 | 1 | Binding-protein-dependent transport system inner membrane component | 89-265 | 70.0 | 2e-19
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_059128816.1 | MULTISPECIES: carbohydrate ABC transporter permease [unclass...
| 1158 | 1.1e-158 |
| WP_055518969.1 | carbohydrate ABC transporter permease [Streptomyces ossamyce...
| 1155 | 3.5e-158 |
| WP_071368607.1 | carbohydrate ABC transporter permease [Streptomyces colonosa...
| 1154 | 5.1e-158 |
| WP_189783905.1 | carbohydrate ABC transporter permease [Streptomyces capitifo...
| 1153 | 5.4e-158 |
| WP_161365325.1 | MULTISPECIES: carbohydrate ABC transporter permease [Strepto...
| 1152 | 9.6e-158 |
| WP_107455517.1 | carbohydrate ABC transporter permease [Streptomyces sp. A244...
| 1151 | 1.1e-157 |
| WP_055713662.1 | carbohydrate ABC transporter permease [Streptomyces torulosu...
| 1151 | 1.3e-157 |
| WP_107463212.1 | carbohydrate ABC transporter permease [Streptomyces sp. MA51...
| 1149 | 2.3e-157 |
| WP_053750176.1 | carbohydrate ABC transporter permease [Streptomyces sp. MMG1...
| 1150 | 2.8e-157 |
| WP_059079153.1 | carbohydrate ABC transporter permease [Streptomyces scabiei]...
| 1148 | 3.6e-157 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5755 | Seems to have a cleavable N-term signal seq.
|