| ID | SAVERM_3023
| Type | CDS
|
| From | 3780104
| nt length | 765
|
| To | 3780868
| aa length | 254
|
| Gene | dasR
| pI | 9.17
|
| Definition | putative GntR-family transcriptional regulator
| M.W (Da) | 28226
|
| Note | PF07702: UTRA domain
| AseI frg. | N
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5231 putative gntR-family transcriptional regulator | 481 | 8.0e-176
|
| sgr | SGR_2282 GntR-family transcriptional regulator | 452 | 2.0e-164
|
| sam | SAM23877_5019 HTH-type transcriptional repressor DasR | 482 | 6.0e-176
|
| scab | SCAB30201 putative GntR-family transcriptional regulator | 491 | 1.0e-179
|
| sace | SACE_0500 putative GntR-family transcriptional regulator | 295 | 5.0e-102
|
| nfar | nfa35320 transcriptional regulator | 154 | 9.5e-39
|
| cglu | gi|19554082 COG2188:Transcriptional regulators [Corynebacterium glutamicum] | 142 | 2.0e-35
|
| bsub | BG14124 yvoA; similar to transcriptional regulator (GntR family) | 166 | 1.3e-42
|
| ecoli | gi|16128705 transcriptional regulator of succinylCoA synthetase operon [Escherichia coli K12] | 110 | 1.2e-25
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UTRA | 1 | UTRA domain | 104-244 | 147.5 | 2.1e-43
|
| GntR | 1 | Bacterial regulatory proteins, gntR family | 35-84 | 62.2 | 2.5e-17
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_200304976.1 | GntR family transcriptional regulator [Streptomyces adelaide...
| 1283 | 1.5e-178 |
| WP_028802055.1 | MULTISPECIES: GntR family transcriptional regulator [unclass...
| 1280 | 4.2e-178 |
| WP_037620853.1 | GntR family transcriptional regulator [Streptomyces aureus]
| 1279 | 5.3e-178 |
| WP_220646608.1 | GntR family transcriptional regulator [Streptomyces sp. MG28...
| 1277 | 1.0e-177 |
| WP_103554145.1 | MULTISPECIES: GntR family transcriptional regulator [Strepto...
| 1276 | 1.6e-177 |
| WP_224736779.1 | GntR family transcriptional regulator [Streptomyces sp. PSKA...
| 1276 | 1.6e-177 |
| WP_188336939.1 | GntR family transcriptional regulator [Streptomyces xanthii]...
| 1275 | 2.0e-177 |
| WP_173894651.1 | MULTISPECIES: GntR family transcriptional regulator [unclass...
| 1275 | 2.2e-177 |
| WP_152171606.1 | GntR family transcriptional regulator [Streptomyces phaeoliv...
| 1274 | 3.6e-177 |
| WP_141574277.1 | GntR family transcriptional regulator [Streptomyces ipomoeae...
| 1274 | 3.7e-177 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3924 | Seems to have no N-terminal signal seq.
|