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IDSAVERM_3030 TypeCDS
From3787680 nt length981
To3788660 aa length326
GenebdpB pI6.44
Definitionputative AraC-family transcriptional regulator M.W (Da)35654
NotePF01965: DJ-1/PfpI family, PF00165: Bacterial regulatory helix-turn-helix proteins, AraC family AseI frg.N
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5224 putative araC-family transcriptional regulator5530.0e+00
sgrSGR_2301 putative AdpA-family transcriptional regulator5230.0e+00
samSAM23877_5012 AraC family transcription regulator5550.0e+00
scabSCAB30291 putative AraC-family transcriptional regulator5700.0e+00
saceSACE_4209 transcriptional regulator, AraC family3522.0e-122
nfarnfa17020 transcriptional regulator3478.1e-97
paerPA3782 [gene=PA3782] [prot=probable transcriptional regulator] [comment=PA3782]2892.7e-79

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain234-31276.61.2e-21

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family221-26158.73.6e-16

DJ-1_PfpI1DJ-1/PfpI family5-17357.99.8e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_217567776.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14990.0e+00
WP_067368675.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 14980.0e+00
WP_190172811.1 helix-turn-helix domain-containing protein [Streptomyces mir... 14980.0e+00
WP_168495389.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 14980.0e+00
WP_095852677.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14950.0e+00
WP_168530148.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14910.0e+00
QIY98171.1 helix-turn-helix domain-containing protein [Streptomyces sp. S1D4... 14910.0e+00
WP_097224819.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14900.0e+00
SOE30360.1 transcriptional regulator, AraC family with amidase-like domain ... 14890.0e+00
WP_054228277.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 14870.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.3293 Seems to have no N-terminal signal seq.