| ID | SAVERM_3033
| Type | CDS
|
| From | 3792201
| nt length | 651
|
| To | 3791551
| aa length | 216
|
| Gene | def1
| pI | 4.43
|
| Definition | putative polypeptide deformylase
| M.W (Da) | 24103
|
| Note | PF01327: Polypeptide deformylase
| AseI frg. | N
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5221 putative polypeptide deformylase | 412 | 2.0e-149
|
| sgr | SGR_2303 putative polypeptide deformylase | 344 | 9.0e-123
|
| sam | SAM23877_5009 Peptide deformylase 4 | 413 | 4.0e-150
|
| scab | SCAB30301 putative polypeptide deformylase | 404 | 3.0e-146
|
| sace | SACE_0514 putative polypeptide deformylase | 182 | 5.0e-59
|
| mtub | gi|15607570 peptide deformylase [Mycobacterium tuberculosis H37Rv] | 142 | 1.3e-35
|
| cglu | gi|19553932 COG0242:N-formylmethionyl-tRNA deformylase [Corynebacterium glutamicum] | 149 | 7.7e-38
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Pep_deformylase | 1 | Polypeptide deformylase | 42-196 | 154.8 | 1.2e-45
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3154 | Seems to have no N-terminal signal seq.
|