| ID | SAVERM_3041
| Type | CDS
|
| From | 3799157
| nt length | 732
|
| To | 3799888
| aa length | 243
|
| Gene |
| pI | 9.19
|
| Definition | putative integral membrane protein
| M.W (Da) | 25507
|
| Note |
| AseI frg. | N
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5213 putative integral membrane protein | 332 | 3.0e-117
|
| sgr | SGR_2309 putative integral membrane protein | 316 | 1.0e-110
|
| sam | SAM23877_5001 putative integral membrane protein | 377 | 1.0e-134
|
| scab | SCAB30411 putative integral membrane protein | 338 | 2.0e-119
|
| sace | SACE_5652 integral membrane protein | 219 | 1.0e-72
|
| nfar | nfa23670 hypothetical protein | 243 | 1.1e-65
|
| ecoli | gi|16128755 putative integral membrane protein, transport [Escherichia coli K12] | 31 | 6.7e-02
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Peptidase_M50B | 1 | Peptidase M50B-like | 33-235 | 210.8 | 1.4e-62
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_006383409.1 | MULTISPECIES: M50 family metallopeptidase [Streptomyces] >gb...
| 753 | 3.1e-98 |
| WP_108014046.1 | MULTISPECIES: M50 family metallopeptidase [unclassified Stre...
| 744 | 6.1e-97 |
| WP_095747973.1 | M50 family metallopeptidase [Streptomyces sp. SA15] >gb
| 742 | 1.2e-96 |
| WP_235474963.1 | M50 family metallopeptidase [Streptomyces sp. GQFP] >lcl
| 741 | 1.8e-96 |
| WP_016437900.1 | M50 family metallopeptidase [Streptomyces sp. HGB0020] >gb
| 741 | 2.0e-96 |
| WP_105975388.1 | M50 family metallopeptidase [Streptomyces geranii]
| 738 | 4.7e-96 |
| WP_103548065.1 | M50 family metallopeptidase [Streptomyces populi] >gb
| 732 | 5.5e-95 |
| WP_151472821.1 | M50 family metallopeptidase [Streptomyces triticiradicis] >l...
| 731 | 6.0e-95 |
| WP_194079725.1 | M50 family metallopeptidase [Streptomyces justiciae] >lcl
| 726 | 2.6e-94 |
|
| 726 | 3.8e-94 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5437 | Seems to have no N-terminal signal seq.
|