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IDSAVERM_3054 TypeCDS
From3815227 nt length1851
To3813377 aa length616
Gene pI5.75
Definitionhypothetical protein M.W (Da)65749
NotePF00515: TPR Domain AseI frg.N
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5205 hypothetical protein8540.0e+00
sgrSGR_2318 conserved hypothetical protein7370.0e+00
samSAM23877_4992 hypothetical protein8600.0e+00
scabSCAB30491 hypothetical protein8300.0e+00
nfarnfa27220 hypothetical protein697.0e-13
ecoligi|49176040 hypothetical protein b0644 [Escherichia coli K12]964.1e-21
paerPA4516 [gene=PA4516] [prot=hypothetical protein] [comment=PA4516]782.1e-15

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sel110Sel1 repeat119-150, 164-181, 207-228, 263-292, 346-356, 376-388, 390-423, 456-500, 515-532, 548-56459.13.8e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_179332571.1 SEL1-like repeat protein [Streptomyces sp. Tue6028] >gb 18830.0e+00
WP_081219316.1 sel1 repeat family protein [Streptomyces sp. M41(2017)] >gb 18770.0e+00
WP_099499776.1 MULTISPECIES: SEL1-like repeat protein [Streptomyces] >gb 18760.0e+00
WP_164371945.1 sel1 repeat family protein [Streptomyces sp. SID14446] >gb 18720.0e+00
WP_028802032.1 tetratricopeptide repeat protein [Streptomyces sp. 142MFCol3... 18620.0e+00
WP_189189363.1 sel1 repeat family protein [Streptomyces albiflavescens] >db... 18580.0e+00
WP_151472812.1 SEL1-like repeat protein [Streptomyces triticiradicis] >lcl 18510.0e+00
WP_046260471.1 SEL1-like repeat protein [Streptomyces sp. WM6386] >gb 18500.0e+00
WP_103548057.1 SEL1-like repeat protein [Streptomyces populi] >gb 18500.0e+00
WP_037620818.1 SEL1-like repeat protein [Streptomyces aureus] 18400.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2909 Seems to have no N-terminal signal seq.