| ID | SAVERM_3068
| Type | CDS
|
| From | 3830229
| nt length | 1356
|
| To | 3831584
| aa length | 451
|
| Gene |
| pI | 4.58
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 49394
|
| Note | PF03109: ABC1 family
| AseI frg. | X
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5192 hypothetical protein | 767 | 0.0e+00
|
| sgr | SGR_2332 putative ABC transporter ATP-binding protein | 765 | 0.0e+00
|
| sam | SAM23877_4975 hypothetical protein | 790 | 0.0e+00
|
| scab | SCAB30671 putative ABC transporter ATP-binding protein | 769 | 0.0e+00
|
| sace | SACE_1096 ABC transporter ATP-binding protein | 489 | 8.0e-173
|
| nfar | nfa45310 ATP-binding protein | 411 | 6.9e-116
|
| mtub | gi|15610333 PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER [Mycobacterium tuberculosis H37Rv] | 393 | 1.1e-110
|
| ecoli | gi|16131684 putative ubiquinone biosynthesis protein UbiB [Escherichia coli K12] | 89 | 3.5e-19
|
| paer | PA5065 [gene=PA5065] [prot=conserved hypothetical protein] [comment=PA5065] | 93 | 2.5e-20
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC1 | 1 | ABC1 family | 113-227 | 105.1 | 2.2e-30
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_168530126.1 | AarF/ABC1/UbiB kinase family protein [Streptomyces sp. RPA4-...
| 2021 | 0.0e+00 |
| WP_095936513.1 | AarF/ABC1/UbiB kinase family protein [Streptomyces sp. Tue60...
| 2016 | 0.0e+00 |
| WP_055610523.1 | AarF/ABC1/UbiB kinase family protein [Streptomyces phaeochro...
| 2015 | 0.0e+00 |
| WP_190229727.1 | AarF/ABC1/UbiB kinase family protein [Streptomyces umbrinus]...
| 2015 | 0.0e+00 |
| WP_152777575.1 | AarF/ABC1/UbiB kinase family protein [Streptomyces spongiae]...
| 2014 | 0.0e+00 |
| WP_200395982.1 | AarF/ABC1/UbiB kinase family protein [Streptomyces sp. ZYC-3...
| 2014 | 0.0e+00 |
| WP_143636483.1 | AarF/ABC1/UbiB kinase family protein [Streptomyces sp. IB201...
| 2014 | 0.0e+00 |
| WP_071366317.1 | AarF/ABC1/UbiB kinase family protein [Streptomyces colonosan...
| 2013 | 0.0e+00 |
| WP_152790257.1 | AarF/ABC1/UbiB kinase family protein [Streptomyces phyllanth...
| 2013 | 0.0e+00 |
| WP_028802019.1 | AarF/ABC1/UbiB kinase family protein [Streptomyces sp. 142MF...
| 2011 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0886 | Seems to have no N-terminal signal seq.
|