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IDSAVERM_3070 TypeCDS
From3832545 nt length369
To3832177 aa length122
Gene pI4.9
Definitionputative WhiB-family transcriptional regulator M.W (Da)13190
NotePF02467: Transcription factor WhiB AseI frg.X
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5190 putative WhiB-family transcriptional regulator2101.0e-72
sgrSGR_2335 putative WhiB-family transcriptional regulator1771.0e-59
samSAM23877_4973 Transcriptional regulator WhiB2057.0e-71
scabSCAB30701 putative WhiB-family transcriptional regulator2439.0e-86
saceSACE_1093 WhiB-family transcriptional regulator877.0e-24
nfarnfa45320 transcriptional regulator1134.1e-27
mtubgi|57117070 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB7 [Mycobacterium tuberculosis H37Rv]1027.4e-24

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Whib1Transcription factor WhiB49-9755.65.6e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_153288737.1 WhiB family transcriptional regulator [Streptomyces fagopyri... 4714.3e-59
NUO41889.1 WhiB family transcriptional regulator [Streptomyces sp.] >gb 4705.0e-59
WP_053664703.1 MULTISPECIES: WhiB family transcriptional regulator [Strepto... 4705.1e-59
WP_037660091.1 MULTISPECIES: WhiB family transcriptional regulator [Strepto... 4681.2e-58
WP_030668930.1 MULTISPECIES: WhiB family transcriptional regulator [Strepto... 4681.2e-58
WP_055638270.1 MULTISPECIES: WhiB family transcriptional regulator [Strepto... 4671.4e-58
WP_143627167.1 WhiB family transcriptional regulator [Streptomyces sp. 1-11... 4671.5e-58
WP_189953718.1 WhiB family transcriptional regulator [Streptomyces alanosin... 4671.8e-58
WP_020119791.1 MULTISPECIES: WhiB family transcriptional regulator [Strepto... 4671.8e-58
WP_055610526.1 WhiB family transcriptional regulator [Streptomyces phaeochr... 4662.1e-58

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3491 Seems to have no N-terminal signal seq.