| ID | SAVERM_3077
| Type | CDS
|
| From | 3845605
| nt length | 3390
|
| To | 3842216
| aa length | 1129
|
| Gene | addA
| pI | 6.99
|
| Definition | putative ATP-dependent DNA helicase
| M.W (Da) | 122111
|
| Note | PF00580: UvrD/REP helicase
| AseI frg. | X
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | DNA modification & repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5183 putative ATP-dependent DNA helicase | 1839 | 0.0e+00
|
| sgr | SGR_2342 putative ATP-dependent DNA helicase | 1744 | 0.0e+00
|
| sam | SAM23877_4966 ATP-dependent DNA helicase | 791 | 0.0e+00
|
| scab | SCAB30771 putative ATP-dependent DNA helicase | 1797 | 0.0e+00
|
| sace | SACE_1077 possible ATP-dependent DNA helicase | 476 | 7.0e-151
|
| nfar | nfa45390 helicase | 418 | 1.5e-117
|
| mtub | gi|15610338 POSSIBLE ATP-DEPENDENT DNA HELICASE [Mycobacterium tuberculosis H37Rv] | 483 | 2.3e-137
|
| cglu | gi|19552001 COG0210:Superfamily I DNA and RNA helicases [Corynebacterium glutamicum] | 422 | 5.7e-119
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UvrD-helicase | 1 | UvrD/REP helicase N-terminal domain | 39-318 | 168.0 | 3.3e-49
|
| PDDEXK_1 | 1 | PD-(D/E)XK nuclease superfamily | 866-1118 | 131.4 | 5e-38
|
| AAA_19 | 1 | AAA domain | 42-304 | 114.0 | 6.7e-33
|
| UvrD_C | 1 | UvrD-like helicase C-terminal domain | 630-760 | 83.8 | 1.4e-23
|
| AAA_30 | 1 | AAA domain | 38-124 | 40.5 | 2.2e-10
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4129 | Seems to have no N-terminal signal seq.
|