| ID | SAVERM_3128
| Type | CDS
|
| From | 3901413
| nt length | 1095
|
| To | 3900319
| aa length | 364
|
| Gene | aspB2
| pI | 6.51
|
| Definition | putative aspartate aminotransferase
| M.W (Da) | 39290
|
| Note | PF00155: Aminotransferase class I and II
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5136 putative aminotransferase | 643 | 0.0e+00
|
| sgr | SGR_2389 putative aminotransferase | 620 | 0.0e+00
|
| sam | SAM23877_4914 N-succinyldiaminopimelate aminotransferase | 650 | 0.0e+00
|
| scab | SCAB31261 putative aspartate aminotransferase | 634 | 0.0e+00
|
| sace | SACE_1011 succinyldiaminopimelate aminotransferase | 411 | 3.0e-144
|
| nfar | nfa47500 aminotransferase | 415 | 3.6e-117
|
| mtub | gi|15608318 hypothetical protein Rv1178 [Mycobacterium tuberculosis H37Rv] | 440 | 8.1e-125
|
| cglu | gi|19552329 COG0436:PLP-dependent aminotransferases [Corynebacterium glutamicum] | 356 | 8.3e-100
|
| paer | PA4715 [gene=PA4715] [prot=probable aminotransferase] [comment=PA4715] | 148 | 6.7e-37
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Aminotran_1_2 | 1 | Aminotransferase class I and II | 30-363 | 146.7 | 9e-43
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498039.1 | bifunctional succinyldiaminopimelate transaminase/glutamate-...
| 1716 | 0.0e+00 |
| WP_006375736.1 | MULTISPECIES: bifunctional succinyldiaminopimelate transamin...
| 1709 | 0.0e+00 |
| WP_095936455.1 | bifunctional succinyldiaminopimelate transaminase/glutamate-...
| 1697 | 0.0e+00 |
| WP_054228228.1 | MULTISPECIES: bifunctional succinyldiaminopimelate transamin...
| 1691 | 0.0e+00 |
| WP_028801962.1 | bifunctional succinyldiaminopimelate transaminase/glutamate-...
| 1689 | 0.0e+00 |
|
| 1686 | 0.0e+00 |
| WP_060901374.1 | MULTISPECIES: bifunctional succinyldiaminopimelate transamin...
| 1685 | 0.0e+00 |
|
| 1683 | 0.0e+00 |
| WP_189784632.1 | bifunctional succinyldiaminopimelate transaminase/glutamate-...
| 1681 | 0.0e+00 |
| WP_189147072.1 | bifunctional succinyldiaminopimelate transaminase/glutamate-...
| 1680 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3975 | Seems to have no N-terminal signal seq.
|