| ID | SAVERM_3129
| Type | CDS
|
| From | 3901962
| nt length | 321
|
| To | 3901642
| aa length | 106
|
| Gene | fdxD
| pI | 3.85
|
| Definition | putative ferredoxin
| M.W (Da) | 11856
|
| Note | PF00037: 4Fe-4S binding domain
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5135 ferredoxin | 212 | 6.0e-74
|
| sgr | SGR_2390 putative ferredoxin | 207 | 7.0e-72
|
| sam | SAM23877_4913 Ferredoxin | 211 | 9.0e-74
|
| scab | SCAB31271 putative ferredoxin | 207 | 6.0e-72
|
| sace | SACE_1010 4Fe-4S ferredoxin, iron-sulfur binding protein | 172 | 4.0e-58
|
| nfar | nfa47510 ferredoxin | 194 | 6.9e-52
|
| mtub | gi|15608317 PROBABLE FERREDOXIN FDXC [Mycobacterium tuberculosis H37Rv] | 179 | 4.5e-47
|
| cglu | gi|19552328 COG1146:Ferredoxin 3 [Corynebacterium glutamicum] | 186 | 2.1e-49
|
| ecoli | gi|16129586 electron transport complex protein RnfB [Escherichia coli K12] | 43 | 3.8e-06
|
| paer | PA3621 [gene=fdxA] [prot=ferredoxin I] [comment=PA3621] | 97 | 2.0e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Fer4 | 1 | 4Fe-4S binding domain | 34-55 | 40.2 | 1.7e-10
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3737 | Seems to have no N-terminal signal seq.
|