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IDSAVERM_3134 TypeCDS
From3906955 nt length759
To3906197 aa length252
Gene pI10.53
Definitionputative ABC transporter permease protein M.W (Da)27150
NotePF01061: ABC-2 type transporter AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5130 putative ABC transporter integral membrane protein3972.0e-142
scabSCAB31321 putative ABC transporter permease protein4059.0e-146
nfarnfa55030 transporter731.6e-14
bsubBG12444 yvfS; ABC-2 type transport system permease protein1244.1e-30

*coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane_31ABC-2 family transporter protein56-23956.32.5e-15

ABC2_membrane1ABC-2 type transporter9-20843.42.4e-11

ABC2_membrane_51ABC-2 family transporter protein58-20328.31.1e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498041.1 ABC transporter permease [Streptomyces sp. SID5469] 12142.9e-168
MYR45465.1 ABC transporter permease [Streptomyces sp. SID5910] 11353.2e-156
WP_202437711.1 ABC transporter permease [Streptomyces sp. SID5910] 11335.3e-156
WP_055525244.1 ABC transporter permease [Streptomyces graminilatus] 11337.0e-156
WP_235459854.1 ABC transporter permease [Streptomyces olivochromogenes] >lc... 11321.2e-155
WP_200401529.1 ABC transporter permease [Streptomyces sp. ZYC-3] >gb 11223.0e-154
GHB19765.1 ABC transporter [Streptomyces umbrinus] >dbj 11234.3e-154
WP_189838429.1 ABC transporter permease [Streptomyces umbrinus] 11214.9e-154
WP_055618023.1 ABC transporter permease [Streptomyces phaeochromogenes] 11171.7e-153
WP_235475041.1 ABC transporter permease [Streptomyces sp. GQFP] >lcl 11137.8e-153

PSORT result

LocalizationCertaintyPSORT said
membrane0.5288 Seems to have no N-terminal signal seq.