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IDSAVERM_3147 TypeCDS
From3920631 nt length921
To3919711 aa length306
GeneoppC4 pI9.42
Definitionputative peptide ABC transporter permease protein M.W (Da)32006
NotePF00528: Binding-protein-dependent transport system inner membrane component AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5119 putative peptide transport system integral membrane protein5000.0e+00
sgrSGR_2411 putative peptide ABC transporter permease protein4622.0e-166
samSAM23877_4903 Peptide transport system integral membrane protein5040.0e+00
scabSCAB31411 putative peptide ABC transporter permease protein5050.0e+00
saceSACE_0846 ABC peptide transporter, permease component2795.0e-94
mtubgi|15610800 PROBABLE DIPEPTIDE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER DPPC [Mycobacterium tuberculosis H37Rv]2769.5e-76
cglugi|19553196 COG1173:ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Corynebacterium glutamicum]3269.6e-91
bsubBG10773 oppC, spo0KC; oligopeptide transport system permease protein2014.5e-53

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component122-30692.32.7e-26

OppC_N1N-terminal TM domain of oligopeptide transport permease C29-6940.81.5e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_151479021.1 ABC transporter permease [Streptomyces albicerus] 11869.1e-162
WP_190218671.1 ABC transporter permease [Streptomyces griseosporeus] >dbj 11832.2e-161
WP_097252576.1 ABC transporter permease [Streptomyces sp. Ag109_G2-15] >emb... 11824.0e-161
11806.9e-161
WP_067300202.1 ABC transporter permease [Streptomyces griseochromogenes] >g... 11807.7e-161
WP_094215121.1 ABC transporter permease [Streptomyces diastatochromogenes] ... 11808.5e-161
WP_067006033.1 ABC transporter permease [Streptomyces cellostaticus] >gb 11781.2e-160
WP_110630208.1 ABC transporter permease [Streptomyces actuosus] >gb 11781.7e-160
WP_030594762.1 ABC transporter permease [Streptomyces fulvoviolaceus] 11771.8e-160
WP_200686591.1 ABC transporter permease [Streptomyces sp. MBT65] >lcl 11746.6e-160

PSORT result

LocalizationCertaintyPSORT said
membrane0.6922 Seems to have no N-terminal signal seq.