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IDSAVERM_3148 TypeCDS
From3921604 nt length924
To3920681 aa length307
GeneoppB4 pI9.93
Definitionputative peptide ABC transporter permease protein M.W (Da)33553
NoteTat substrate, PF00528: Binding-protein-dependent transport system inner membrane component AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5118 putative peptide transport system integral membrane protein5220.0e+00
sgrSGR_2412 putative peptide ABC transporter permease protein5260.0e+00
samSAM23877_4902 putative peptide transport system integral membrane protein5130.0e+00
scabSCAB31421 putative peptide ABC transporter permease protein5160.0e+00
saceSACE_0845 putative peptide ABC transporter, permease component3396.0e-118
nfarnfa17470 peptide transporter1592.2e-40
mtubgi|15610801 PROBABLE DIPEPTIDE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER DPPB [Mycobacterium tuberculosis H37Rv]3482.6e-97
cglugi|19553195 COG0601:ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Corynebacterium glutamicum]3473.1e-97
bsubBG10772 oppB, spo0KB; oligopeptide transport system permease protein2001.0e-52
ecoligi|16131415 dipeptide transport protein 1 (ABC superfamily, membrane) [Escherichia coli K12]2178.9e-58
paerPA4503 [gene=PA4503] [prot=probable permease of ABC transporter] [comment=PA4503]2116.7e-56

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component112-306134.82.6e-39

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_075028758.1 ABC transporter permease [Streptomyces mirabilis] >emb 12671.9e-174
WP_095852751.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 12654.3e-174
WP_189510258.1 ABC transporter permease [Streptomyces narbonensis] >dbj 12645.3e-174
WP_067368430.1 ABC transporter permease [Streptomyces olivochromogenes] >gb... 12638.0e-174
WP_143609144.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 12631.0e-173
WP_168495239.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 12621.2e-173
WP_054228241.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 12621.4e-173
WP_190178797.1 ABC transporter permease [Streptomyces naganishii] >dbj 12584.6e-173
WP_107442077.1 ABC transporter permease [Streptomyces sp. P3] >gb 12576.1e-173
WP_217241100.1 ABC transporter permease [Streptomyces sp. AC555_RSS877] 12569.2e-173

PSORT result

LocalizationCertaintyPSORT said
membrane0.5628 Seems to have an uncleavable N-term signal seq