-- | --

IDSAVERM_3166 TypeCDS
From3944108 nt length1020
To3943089 aa length339
GenebdpE pI8.03
Definitionputative AraC-family transcriptional regulator M.W (Da)35959
NotePF01965: DJ-1/PfpI family, PF00165: Bacterial regulatory helix-turn-helix proteins, AraC family AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_4780 putative AdpA-family transcriptional regulator3639.0e-127
saceSACE_1147 AraC-family transcriptional regulator4973.0e-179
ecoligi|16132213 right origin-binding protein [Escherichia coli K12]562.3e-09

*sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain233-31176.61.2e-21

DJ-1_PfpI1DJ-1/PfpI family41-17265.16.1e-18

HTH_AraC2Bacterial regulatory helix-turn-helix proteins, AraC family223-260, 272-31160.41e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_136738436.1 helix-turn-helix domain-containing protein [Streptomyces pin... 12955.9e-178
WP_128509983.1 helix-turn-helix domain-containing protein [Streptomyces inh... 12861.6e-176
WP_109886439.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12591.6e-172
WP_159484598.1 helix-turn-helix domain-containing protein [Streptomyces lib... 12583.0e-172
WP_158890107.1 helix-turn-helix domain-containing protein [Amycolatopsis an... 12531.5e-171
WP_109894932.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12512.9e-171
WP_190144261.1 helix-turn-helix domain-containing protein [Streptomyces gle... 12505.0e-171
WP_030800769.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12411.0e-169
WP_191327195.1 helix-turn-helix domain-containing protein [Actinomadura cre... 12383.1e-169
GGU95427.1 AraC family transcriptional regulator [Actinomadura cremea] 12386.9e-169

PSORT result

LocalizationCertaintyPSORT said
membrane0.2508 Seems to have no N-terminal signal seq.