| ID | SAVERM_3222
| Type | CDS
|
| From | 4015793
| nt length | 693
|
| To | 4016485
| aa length | 230
|
| Gene |
| pI | 5.33
|
| Definition | hypothetical protein
| M.W (Da) | 26325
|
| Note | PF04167: Protein of unknown function (DUF402)
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5041 hypothetical protein | 358 | 7.0e-128
|
| sgr | SGR_2492 conserved hypothetical protein | 328 | 4.0e-116
|
| sam | SAM23877_4843 hypothetical protein | 364 | 6.0e-130
|
| scab | SCAB33581 hypothetical protein | 358 | 5.0e-128
|
| sace | SACE_1644 protein of unknown function DUF402 | 123 | 1.0e-35
|
| nfar | nfa270 hypothetical protein | 30 | 1.8e-01
|
| mtub | gi|15608770 hypothetical protein Rv1632c [Mycobacterium tuberculosis H37Rv] | 31 | 3.6e-02
|
| bsub | BG12223 ygaC; hypothetical protein | 33 | 8.5e-03
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF402 | 1 | Protein of unknown function (DUF402) | 100-164 | 50.8 | 1.3e-13
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_210585604.1 | DUF402 domain-containing protein [Streptomyces sp. GESEQ-35]
| 1058 | 3.9e-145 |
| WP_199827513.1 | DUF402 domain-containing protein [Streptomyces xylophagus]
| 1049 | 9.2e-144 |
| WP_199847868.1 | DUF402 domain-containing protein [Streptomyces dysideae]
| 1048 | 1.4e-143 |
| WP_192583219.1 | DUF402 domain-containing protein [Streptomyces albicerus]
| 1043 | 9.0e-143 |
| WP_189837415.1 | DUF402 domain-containing protein [Streptomyces umbrinus]
| 1042 | 1.2e-142 |
| WP_200396085.1 | DUF402 domain-containing protein [Streptomyces sp. ZYC-3] >g...
| 1040 | 2.5e-142 |
| WP_198539340.1 | DUF402 domain-containing protein [Streptomyces graminilatus]
| 1036 | 1.1e-141 |
| WP_138045948.1 | DUF402 domain-containing protein [Streptomyces montanus] >lc...
| 1034 | 2.0e-141 |
| WP_150947281.1 | DUF402 domain-containing protein [Streptomyces luteolifulvus...
| 1033 | 2.5e-141 |
| WP_235475126.1 | DUF402 domain-containing protein [Streptomyces sp. GQFP] >lc...
| 1033 | 2.8e-141 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3225 | Seems to have no N-terminal signal seq.
|