| ID | SAVERM_3232
| Type | CDS
|
| From | 4029374
| nt length | 555
|
| To | 4029928
| aa length | 184
|
| Gene | ahpC
| pI | 4.36
|
| Definition | putative alkyl hydroperoxide reductase
| M.W (Da) | 20773
|
| Note | PF00578: AhpC/TSA family
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | detoxification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5032 ahpC alkyl hydroperoxide reductase | 364 | 1.0e-131
|
| sgr | SGR_2501 putative alkyl hydroperoxide reductase | 361 | 3.0e-130
|
| sam | SAM23877_4834 Alkyl hydroperoxide reductase subunit C | 369 | 2.0e-133
|
| nfar | nfa37890 ahpC alkylhydroperoxide reductase | 236 | 1.2e-63
|
| mtub | gi|15609565 ALKYL HYDROPEROXIDE REDUCTASE C PROTEIN AHPC (ALKYL HYDROPEROXIDASE C) [Mycobacterium tuberculosis H37Rv] | 229 | 6.5e-62
|
| bsub | BG13305 ykuU; similar to 2-cys peroxiredoxin | 134 | 2.5e-33
|
| ecoli | gi|16128588 alkyl hydroperoxide reductase, C22 subunit, thioredoxin-like, detoxification of hydroperoxides [Escherichia coli K12] | 112 | 1.2e-26
|
| paer | PA0848 [gene=PA0848] [prot=probable alkyl hydroperoxide reductase] [comment=PA0848] | 127 | 6.1e-31
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AhpC-TSA | 1 | AhpC/TSA family | 4-136 | 115.8 | 1e-33
|
| Redoxin | 1 | Redoxin | 4-141 | 64.2 | 9.1e-18
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2359 | Seems to have no N-terminal signal seq.
|