| ID | SAVERM_3278
| Type | CDS
|
| From | 4080219
| nt length | 420
|
| To | 4079800
| aa length | 139
|
| Gene |
| pI | 4.88
|
| Definition | hypothetical protein
| M.W (Da) | 15034
|
| Note | PF01042: Endoribonuclease L-PSP
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4990 conserved hypothetical protein | 247 | 9.0e-87
|
| sgr | SGR_2543 conserved hypothetical protein | 241 | 2.0e-84
|
| sam | SAM23877_4802 hypothetical protein | 251 | 2.0e-88
|
| scab | SCAB33931 hypothetical protein | 240 | 6.0e-84
|
| sace | SACE_5297 hypothetical protein | 119 | 2.0e-36
|
| bsub | BG10111 yabJ; translation initiation inhibitor | 70 | 3.6e-14
|
| ecoli | gi|49176315 hypothetical protein b3113 [Escherichia coli K12] | 60 | 5.4e-11
|
| paer | PA5339 [gene=PA5339] [prot=conserved hypothetical protein] [comment=PA5339] | 68 | 2.7e-13
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribonuc_L-PSP | 1 | Endoribonuclease L-PSP | 18-137 | 81.7 | 3.7e-23
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2168 | Seems to have no N-terminal signal seq.
|