| ID | SAVERM_3296
| Type | CDS
|
| From | 4104274
| nt length | 2028
|
| To | 4102247
| aa length | 675
|
| Gene |
| pI | 4.67
|
| Definition | hypothetical protein
| M.W (Da) | 72978
|
| Note | PF03190: Protein of unknown function, DUF255
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4975 conserved hypothetical protein | 1155 | 0.0e+00
|
| sgr | SGR_2558 conserved hypothetical protein | 1061 | 0.0e+00
|
| sam | SAM23877_4786 hypothetical protein | 1142 | 0.0e+00
|
| scab | SCAB34251 hypothetical protein | 1046 | 0.0e+00
|
| sace | SACE_0923 protein of unknown function DUF255 | 726 | 0.0e+00
|
| nfar | nfa48210 hypothetical protein | 650 | 0.0e+00
|
| mtub | gi|15608224 hypothetical protein Rv1084 [Mycobacterium tuberculosis H37Rv] | 598 | 2.8e-172
|
| bsub | BG10040 yyaL; similar to unknown proteins | 448 | 5.4e-127
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Thioredox_DsbH | 1 | Protein of unknown function, DUF255 | 2-162 | 250.8 | 5e-75
|
| Thioredoxin_7 | 1 | Thioredoxin-like | 21-111 | 42.0 | 7.3e-11
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498069.1 | thioredoxin domain-containing protein [Streptomyces sp. SID5...
| 3173 | 0.0e+00 |
| WP_123967172.1 | thioredoxin domain-containing protein [Streptomyces sp. TLI_...
| 2846 | 0.0e+00 |
| WP_079660096.1 | thioredoxin domain-containing protein [Streptomyces sp. 3214...
| 2842 | 0.0e+00 |
| NUR05270.1 | thioredoxin domain-containing protein [Streptomyces sp.]
| 2837 | 0.0e+00 |
| WP_037620584.1 | thioredoxin domain-containing protein [Streptomyces aureus]
| 2833 | 0.0e+00 |
| WP_033323688.1 | thioredoxin domain-containing protein [Streptomyces yerevane...
| 2831 | 0.0e+00 |
| WP_048586167.1 | thioredoxin domain-containing protein [Streptomyces viridoch...
| 2830 | 0.0e+00 |
| WP_189322304.1 | thioredoxin domain-containing protein [Streptomyces flaveus]...
| 2830 | 0.0e+00 |
| WP_030929744.1 | thioredoxin domain-containing protein [Streptomyces sp. NRRL...
| 2829 | 0.0e+00 |
| WP_053753584.1 | thioredoxin domain-containing protein [Streptomyces sp. MMG1...
| 2817 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2613 | Seems to have no N-terminal signal seq.
|