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IDSAVERM_3395 TypeCDS
From4217404 nt length381
To4217784 aa length126
GenesdhC1 pI9.72
Definitionputative succinate dehydrogenase cytochrome b-556 subunit (complex II) M.W (Da)14223
NotePF01127: Succinate dehydrogenase cytochrome b subunit AseI frg.E
SignalP v.4.0Non-secretory protein | plot CategoryTCA cycle

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4858 putative succinate dehydrogenase membrane subunit2368.0e-83
sgrSGR_2687 putative succinate dehydrogenase membrane subunit2302.0e-80
samSAM23877_4675 Succinate dehydrogenase membrane subunit2365.0e-83
scabSCAB35271 putative succinate dehydrogenase cytochrome b-556 subunit (complex II)1964.0e-67
saceSACE_6582 putative succinate dehydrogenase membrane subunit1545.0e-50
nfarnfa9490 sdhC succinate dehydrogenase cytochrome b subunit1665.6e-43
mtubgi|15610452 PROBABLE SUCCINATE DEHYDROGENASE (CYTOCHROME B-556 SUBUNIT) SDHC (SUCCINIC DEHYDROGENASE) (FUMARATE REDUCTASE) (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE) [Mycobacterium tuberculosis H37Rv]1528.8e-39
ecoligi|16128696 succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli K12]364.1e-04
paerPA1581 [gene=sdhC] [prot=succinate dehydrogenase (C subunit)] [comment=PA1581]411.7e-05

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sdh_cyt1Succinate dehydrogenase/Fumarate reductase transmembrane subunit5-10887.75.2e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EPD60852.1 succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp... 5113.8e-65
WP_037884595.1 MULTISPECIES: succinate dehydrogenase, cytochrome b556 subun... 5114.4e-65
WP_079061657.1 succinate dehydrogenase, cytochrome b556 subunit [Streptomyc... 5114.6e-65
WP_108013183.1 MULTISPECIES: succinate dehydrogenase, cytochrome b556 subun... 5114.8e-65
WP_079076942.1 succinate dehydrogenase, cytochrome b556 subunit [Streptomyc... 5105.6e-65
WP_079311791.1 MULTISPECIES: succinate dehydrogenase, cytochrome b556 subun... 5105.9e-65
WP_079056901.1 succinate dehydrogenase, cytochrome b556 subunit [Streptomyc... 5105.9e-65
WP_010351863.1 succinate dehydrogenase, cytochrome b556 subunit [Streptomyc... 5105.9e-65
WP_073495389.1 succinate dehydrogenase, cytochrome b556 subunit [Streptomyc... 5106.6e-65
5098.9e-65

PSORT result

LocalizationCertaintyPSORT said
membrane0.4779 Seems to have an uncleavable N-term signal seq