| ID | SAVERM_3414
| Type | CDS
|
| From | 4236575
| nt length | 1035
|
| To | 4235541
| aa length | 344
|
| Gene |
| pI | 8.47
|
| Definition | putative membrane protein, ribonuclease BN-like family
| M.W (Da) | 36722
|
| Note | PF03631: Ribonuclease BN-like family
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4846 putative integral membrane protein | 382 | 8.0e-134
|
| sgr | SGR_2698 putative integral membrane protein | 345 | 5.0e-119
|
| sam | SAM23877_4661 Integral membrane protein | 374 | 7.0e-131
|
| scab | SCAB35541 putative membrane protein, ribonuclease BN-like family | 395 | 2.0e-139
|
| sace | SACE_6591 possible tRNA-processing ribonuclease BN | 117 | 6.0e-31
|
| nfar | nfa9370 hypothetical protein | 137 | 1.0e-33
|
| mtub | gi|15610471 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 96 | 2.7e-21
|
| cglu | gi|19551908 COG1295:Predicted multitransmembrane protein [Corynebacterium glutamicum] | 107 | 1.1e-24
|
| ecoli | gi|16131394 hypothetical protein b3522 [Escherichia coli K12] | 131 | 7.4e-32
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Virul_fac_BrkB | 1 | Virulence factor BrkB | 72-318 | 172.1 | 1.5e-50
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_053751572.1 | YihY/virulence factor BrkB family protein [Streptomyces sp. ...
| 1047 | 2.9e-140 |
| WP_016434757.1 | YihY/virulence factor BrkB family protein [Streptomyces sp. ...
| 1041 | 1.8e-139 |
| WP_055493278.1 | YihY/virulence factor BrkB family protein [Streptomyces sp. ...
| 1036 | 1.0e-138 |
| WP_181138844.1 | YihY/virulence factor BrkB family protein [Streptomyces sp. ...
| 1037 | 1.9e-138 |
| WP_217235094.1 | YihY/virulence factor BrkB family protein [Streptomyces sp. ...
| 1033 | 3.0e-138 |
| WP_108013195.1 | MULTISPECIES: YihY/virulence factor BrkB family protein [unc...
| 1032 | 4.4e-138 |
| WP_030597470.1 | YihY/virulence factor BrkB family protein [Streptomyces fulv...
| 1020 | 3.1e-136 |
| WP_210593862.1 | YihY/virulence factor BrkB family protein [Streptomyces sp. ...
| 1020 | 3.2e-136 |
| WP_171145377.1 | YihY/virulence factor BrkB family protein [Streptomyces sp. ...
| 1018 | 6.2e-136 |
| WP_232031970.1 | YihY/virulence factor BrkB family protein [Streptomyces linc...
| 1016 | 1.3e-135 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4927 | Seems to have no N-terminal signal seq.
|