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IDSAVERM_3431 TypeCDS
From4253444 nt length1944
To4251501 aa length647
GeneproW pI10.33
Definitionputative glycine betaine ABC transporter permease protein M.W (Da)66878
NoteTat substrate, PF00528: Binding-protein-dependent transport system inner membrane component AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4831 putative glycine betaine ABC transport system integral membrane protein8530.0e+00
sgrSGR_1081 putative glycine betaine ABC transporer permease protein8030.0e+00
samSAM23877_4646 putative glycine betaine ABC transport system integral membrane protein8690.0e+00
scabSCAB6981 putative glycine betaine ABC transporter permease protein3575.0e-115

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_12Binding-protein-dependent transport system inner membrane component159-321, 476-630109.61.4e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189190212.1 ABC transporter permease subunit [Streptomyces albiflavescen... 19490.0e+00
WP_217572157.1 ABC transporter permease subunit [Streptomyces sp. GbtcB7] 19390.0e+00
WP_190170023.1 ABC transporter permease subunit [Streptomyces mirabilis] >d... 19360.0e+00
WP_168494802.1 MULTISPECIES: ABC transporter permease subunit [Streptomyces... 19350.0e+00
WP_067366791.1 ABC transporter permease subunit [Streptomyces olivochromoge... 19340.0e+00
WP_143602688.1 MULTISPECIES: ABC transporter permease subunit [unclassified... 19330.0e+00
WP_181650274.1 ABC transporter permease subunit [Streptomyces sp. WAC00263]... 19300.0e+00
WP_143609046.1 MULTISPECIES: ABC transporter permease subunit [unclassified... 19270.0e+00
WP_095853008.1 ABC transporter permease subunit [Streptomyces sp. Ag82_O1-1... 19270.0e+00
WP_211118050.1 ABC transporter permease subunit [Streptomyces sp. RPA4-2] 19270.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.5458 Seems to have no N-terminal signal seq.