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IDSAVERM_3450 TypeCDS
From4273338 nt length1113
To4274450 aa length370
Gene pI9.37
Definitionhypothetical protein M.W (Da)40142
NotePF08281: Sigma-70, region 4 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4810 hypothetical protein3517.0e-121
sgrSGR_2721 conserved hypothetical protein3231.0e-108
samSAM23877_4625 hypothetical protein3742.0e-128
scabSCAB35781 hypothetical protein3135.0e-106

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_078234416.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12819.6e-174
WP_095936135.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8392.9e-107
WP_097225026.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8403.9e-107
WP_210572939.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8331.6e-106
WP_155058846.1 helix-turn-helix domain-containing protein [Streptomyces bla... 8362.4e-106
WP_095853025.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8343.1e-106
WP_085207885.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8314.5e-106
SFF39999.1 DNA-directed RNA polymerase specialized sigma subunit, sigma24 f... 8291.5e-105
WP_075028655.1 helix-turn-helix domain-containing protein [Streptomyces mir... 8281.6e-105
WP_189707480.1 helix-turn-helix domain-containing protein [Streptomyces pha... 8291.8e-105

PSORT result

LocalizationCertaintyPSORT said
membrane0.3378 Seems to have no N-terminal signal seq.