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IDSAVERM_3458 TypeCDS
From4286007 nt length1215
To4287221 aa length404
Gene pI6.53
Definitionhypothetical protein M.W (Da)43002
NotePF04434: SWIM zinc finger AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4802 hypothetical protein4534.0e-160
sgrSGR_2728 conserved hypothetical protein4876.0e-173
samSAM23877_4618 hypothetical protein5380.0e+00
scabSCAB35861 hypothetical protein5860.0e+00
nfarnfa46490 hypothetical protein2732.0e-74

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SWIM1SWIM zinc finger28-4624.71.2e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_165267849.1 SWIM zinc finger family protein [Streptomyces scabichelini] ... 14630.0e+00
WP_190229550.1 SWIM zinc finger family protein [Streptomyces umbrinus] >dbj... 14380.0e+00
GHB17533.1 hypothetical protein GCM10010306_006900 [Streptomyces umbrinus] 14340.0e+00
WP_189837210.1 SWIM zinc finger family protein [Streptomyces umbrinus] 14340.0e+00
WP_194081478.1 SWIM zinc finger family protein [Streptomyces justiciae] >lc... 14330.0e+00
OPG02076.1 hypothetical protein B1R27_34125 [Streptomyces sp. GKU 895] 14330.0e+00
WP_097267982.1 SWIM zinc finger family protein [Streptomyces sp. TLI_55] >e... 14320.0e+00
WP_126273888.1 SWIM zinc finger family protein [Streptomyces aquilus] >gb 14280.0e+00
WP_171147900.1 SWIM zinc finger family protein [Streptomyces sp. S3(2020)] ... 14280.0e+00
WP_164370406.1 SWIM zinc finger domain-containing protein [Streptomyces sp.... 14230.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1358 Seems to have no N-terminal signal seq.