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IDSAVERM_3506 TypeCDS
From4341154 nt length642
To4341795 aa length213
Gene pI10.61
Definitionputative ABC transporter permease M.W (Da)22818
NotePF00528: Binding-protein-dependent transport system inner membrane component AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
saceSACE_6411 amino acid ABC transporter, permease protein1381.0e-41
mtubgi|15610893 POSSIBLE OSMOPROTECTANT (GLYCINE BETAINE/CARNITINE/CHOLINE/L-PROLINE) TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER PROW [Mycobacterium tuberculosis H37Rv]1491.1e-37
bsubBG12640 opuCD, yvbB; glycine betaine/carnitine/choline transport system permease protein1352.4e-33
paerPA3890 [gene=PA3890] [prot=probable permease of ABC transporter] [comment=PA3890]1413.9e-35

*sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component38-20183.11.8e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
8941.1e-120
WP_235478154.1 ABC transporter permease [Streptomyces sp. GQFP] >lcl 8941.3e-120
WP_046257536.1 ABC transporter permease [Streptomyces sp. WM6386] >gb 8922.7e-120
WP_089102288.1 ABC transporter permease [Streptomyces hyaluromycini] 8912.8e-120
WP_128802139.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 8913.7e-120
WP_217550740.1 ABC transporter permease [Streptomyces sp. GbtcB6] 8904.5e-120
WP_030941763.1 ABC transporter permease [Streptomyces sp. NRRL S-646] 8888.5e-120
WP_105973392.1 ABC transporter permease [Streptomyces geranii] 8871.2e-119
WP_093502111.1 ABC transporter permease [Streptomyces sp. Ag109_O5-10] >emb... 8871.3e-119
WP_019066704.1 ABC transporter permease [Streptomyces hokutonensis] 8861.6e-119

PSORT result

LocalizationCertaintyPSORT said
membrane0.5288 Seems to have no N-terminal signal seq.