| ID | SAVERM_3542
| Type | CDS
|
| From | 4385047
| nt length | 2037
|
| To | 4383011
| aa length | 678
|
| Gene | savM1
| pI | 6.36
|
| Definition | putative type II restriction-modification system DNA adenine-specific methylase
| M.W (Da) | 72329
|
| Note | weak homology to hsdM, PF02384: N-6 DNA Methylase
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | DNA modification & repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3104 hypothetical protein | 975 | 0.0e+00
|
| sgr | SGR_4430 putative restriction-modification system adenine methylase | 573 | 0.0e+00
|
| scab | SCAB54351 DNA modification | 981 | 0.0e+00
|
| sace | SACE_0872 putative type I restriction system adenine methylase | 292 | 3.0e-92
|
| nfar | nfa20590 restriction-modification system endonuclease/methyltransferase | 67 | 3.0e-12
|
| mtub | gi|15609893 POSSIBLE TYPE I RESTRICTION/MODIFICATION SYSTEM DNA METHYLASE HSDM (M PROTEIN) (DNA METHYLTRANSFERASE) [Mycobacterium tuberculosis H37Rv] | 106 | 5.7e-24
|
| bsub | BG11455 ypsC; similar to unknown proteins | 29 | 7.8e-01
|
| ecoli | gi|16132170 DNA methylase M, host modification [Escherichia coli K12] | 35 | 1.6e-02
|
| paer | PA2735 [gene=PA2735] [prot=probable restriction-modification system protein] [comment=PA2735] | 43 | 4.8e-05
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| N6_Mtase | 1 | N-6 DNA Methylase | 168-453 | 117.2 | 8.2e-34
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1447 | Seems to have no N-terminal signal seq.
|