| ID | SAVERM_3544
| Type | CDS
|
| From | 4387428
| nt length | 720
|
| To | 4386709
| aa length | 239
|
| Gene |
| pI | 9.95
|
| Definition | putative lipoprotein
| M.W (Da) | 25224
|
| Note |
| AseI frg. | E
|
| SignalP v.4.0 | Signal peptide | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3107 putative lipoprotein | 160 | 2.0e-49
|
| sgr | SGR_4425 conserved hypothetical protein | 145 | 2.0e-43
|
| sam | SAM23877_3156 putative lipoprotein | 147 | 3.0e-44
|
| scab | SCAB54331 putative lipoprotein | 327 | 3.0e-115
|
| nfar | nfa10250 hypothetical protein | 126 | 1.5e-30
|
| mtub | gi|15610109 POSSIBLE CONSERVED MEMBRANE OR EXPORTED PROTEIN [Mycobacterium tuberculosis H37Rv] | 130 | 1.0e-31
|
| cglu | gi|19552486 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 186 | 6.6e-49
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF1524 | 1 | Protein of unknown function (DUF1524) | 79-213 | 57.4 | 1.3e-15
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498101.1 | HNH endonuclease family protein [Streptomyces sp. SID5469]
| 1143 | 8.3e-158 |
| WP_217573969.1 | DUF1524 domain-containing protein [Streptomyces sp. GbtcB7]
| 972 | 1.0e-131 |
| WP_067376186.1 | HNH endonuclease family protein [Streptomyces olivochromogen...
| 972 | 1.0e-131 |
| WP_190171901.1 | HNH endonuclease family protein [Streptomyces mirabilis] >db...
| 968 | 4.8e-131 |
| WP_189192151.1 | HNH endonuclease family protein [Streptomyces albiflavescens...
| 960 | 8.6e-130 |
| WP_192582538.1 | HNH endonuclease family protein [Streptomyces triticiradicis...
| 943 | 2.9e-127 |
|
| 942 | 3.3e-127 |
| NEB03228.1 | HNH endonuclease [Streptomyces sp. SID13726]
| 936 | 2.9e-126 |
| WP_203615736.1 | HNH endonuclease family protein [Streptomyces sp. SID13726]
| 936 | 3.3e-126 |
| WP_150951131.1 | HNH endonuclease family protein [Streptomyces luteolifulvus]...
| 924 | 1.8e-124 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | May be a lipoprotein
|