| ID | SAVERM_3674
| Type | CDS
|
| From | 4548308
| nt length | 624
|
| To | 4548931
| aa length | 207
|
| Gene |
| pI | 9.59
|
| Definition | putative ligase
| M.W (Da) | 21996
|
| Note | PF01812: 5-formyltetrahydrofolate cyclo-ligase family
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3183 hypothetical protein | 266 | 3.0e-92
|
| sgr | SGR_4295 putative ligase | 183 | 3.0e-60
|
| sam | SAM23877_3231 hypothetical protein | 269 | 3.0e-93
|
| scab | SCAB53121 putative ligase | 285 | 9.0e-100
|
| sace | SACE_0773 5-formyltetrahydrofolate cyclo-ligase | 123 | 6.0e-35
|
| nfar | nfa49540 hypothetical protein | 140 | 1.1e-34
|
| mtub | gi|15608132 hypothetical protein Rv0992c [Mycobacterium tuberculosis H37Rv] | 113 | 8.1e-27
|
| cglu | gi|19552106 COG0212:5-formyltetrahydrofolate cyclo-ligase [Corynebacterium glutamicum] | 129 | 7.8e-32
|
| bsub | BG11681 yqgN; similar to 5-formyltetrahydrofolate cyclo-ligase | 77 | 5.7e-16
|
| ecoli | gi|49176282 putative ligase [Escherichia coli K12] | 77 | 8.3e-16
|
| paer | PA5228 [gene=PA5228] [prot=conserved hypothetical protein] [comment=PA5228] | 68 | 4.1e-13
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| 5-FTHF_cyc-lig | 1 | 5-formyltetrahydrofolate cyclo-ligase family | 12-197 | 144.6 | 2.7e-42
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_079051462.1 | 5-formyltetrahydrofolate cyclo-ligase [Streptomyces curacoi]
| 699 | 3.7e-91 |
| WP_159533736.1 | 5-formyltetrahydrofolate cyclo-ligase [Streptomyces sp. Tu 3...
| 695 | 1.4e-90 |
| WP_215157939.1 | MULTISPECIES: 5-formyltetrahydrofolate cyclo-ligase [unclass...
| 693 | 2.5e-90 |
| WP_148008857.1 | 5-formyltetrahydrofolate cyclo-ligase [Streptomyces sp. me10...
| 691 | 5.7e-90 |
| MPY64232.1 | 5-formyltetrahydrofolate cyclo-ligase [Streptomyces spongiae]
| 690 | 8.6e-90 |
| WP_200396474.1 | 5-formyltetrahydrofolate cyclo-ligase [Streptomyces sp. ZYC-...
| 689 | 1.2e-89 |
| WP_100246992.1 | 5-formyltetrahydrofolate cyclo-ligase [Streptomyces viridoch...
| 688 | 1.9e-89 |
| WP_189837053.1 | 5-formyltetrahydrofolate cyclo-ligase [Streptomyces umbrinus...
| 687 | 2.8e-89 |
| WP_093866473.1 | 5-formyltetrahydrofolate cyclo-ligase [Streptomyces sp. KS_5...
| 686 | 3.2e-89 |
| WP_126901835.1 | 5-formyltetrahydrofolate cyclo-ligase [Streptomyces sp. WAC ...
| 686 | 3.4e-89 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1612 | Seems to have no N-terminal signal seq.
|