| ID | SAVERM_3678
| Type | CDS
|
| From | 4555305
| nt length | 342
|
| To | 4555646
| aa length | 113
|
| Gene |
| pI | 8.32
|
| Definition | hypothetical protein
| M.W (Da) | 11203
|
| Note | PF09723: Putative regulatory protein (CxxC_CxxC_SSSS)
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3187 hypothetical protein | 123 | 2.0e-38
|
| sgr | SGR_4291 hypothetical protein | 125 | 2.0e-39
|
| sam | SAM23877_3235 hypothetical protein | 120 | 2.0e-37
|
| scab | SCAB53081 hypothetical protein | 122 | 5.0e-38
|
| nfar | nfa49550 hypothetical protein | 115 | 1.2e-27
|
| mtub | gi|15608131 CONSERVED HYPOTHETICAL SERINE RICH PROTEIN [Mycobacterium tuberculosis H37Rv] | 116 | 4.2e-28
|
| bsub | BG11362 yxcE; function is unknown | 43 | 2.4e-06
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Zn-ribbon_8 | 1 | Zinc ribbon domain | 1-40 | 54.5 | 8.6e-15
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_124441499.1 | FmdB family transcriptional regulator [Streptomyces sp. NL15...
| 315 | 1.2e-35 |
| WP_095750954.1 | FmdB family transcriptional regulator [Streptomyces sp. SA15...
| 313 | 2.5e-35 |
| WP_100605254.1 | FmdB family transcriptional regulator [Streptomyces sp. CB02...
| 312 | 3.5e-35 |
| WP_176181036.1 | FmdB family transcriptional regulator [Streptomyces sp. NA02...
| 312 | 4.8e-35 |
| WP_129308584.1 | FmdB family transcriptional regulator [Streptomyces sp. L2]
| 310 | 6.4e-35 |
| WP_221905232.1 | FmdB family transcriptional regulator [Streptomyces sp. BHT-...
| 310 | 6.9e-35 |
| MPY60925.1 | FmdB family transcriptional regulator [Streptomyces spongiae]
| 310 | 8.1e-35 |
| WP_079063814.1 | FmdB family transcriptional regulator [Streptomyces sp. NRRL...
| 309 | 9.8e-35 |
|
| 310 | 1.1e-34 |
| WP_189857482.1 | FmdB family transcriptional regulator [Streptomyces albulus]
| 309 | 1.1e-34 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2591 | Seems to have no N-terminal signal seq.
|