| ID | SAVERM_3681
| Type | CDS
|
| From | 4557442
| nt length | 477
|
| To | 4557918
| aa length | 158
|
| Gene | mscL
| pI | 10.02
|
| Definition | putative mechanosensitive channel
| M.W (Da) | 17009
|
| Note | PF01741: Large-conductance mechanosensitive channel, MscL
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3190 putative mechanosensitive channel | 234 | 5.0e-81
|
| sam | SAM23877_3239 Large-conductance mechanosensitive channel | 239 | 3.0e-83
|
| scab | SCAB53051 putative mechanosensitive channel | 254 | 6.0e-89
|
| sace | SACE_0769 large-conductance mechanosensitive channel | 73 | 1.0e-17
|
| nfar | nfa49570 mscL mechanosensitive channel | 90 | 6.1e-20
|
| mtub | gi|15608125 large-conductance mechanosensitive channel [Mycobacterium tuberculosis H37Rv] | 74 | 2.7e-15
|
| cglu | gi|19552104 COG1970:Large-conductance mechanosensitive channel [Corynebacterium glutamicum] | 90 | 3.4e-20
|
| bsub | BG12497 mscL, ywpC; large conductance mechanosensitive channel protein | 67 | 3.8e-13
|
| ecoli | gi|16131170 large-conductance mechanosensitive channel [Escherichia coli K12] | 61 | 3.1e-11
|
| paer | PA4614 [gene=mscL] [prot=conductance mechanosensitive channel] [comment=PA4614] | 68 | 2.0e-13
|
*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MscL | 1 | Large-conductance mechanosensitive channel, MscL | 10-147 | 115.0 | 2.2e-33
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_237529400.1 | MscL family protein [Streptomyces sp. SID5469]
| 739 | 4.2e-99 |
| WP_152169523.1 | large conductance mechanosensitive channel protein MscL [Str...
| 713 | 8.1e-95 |
| WP_086762048.1 | large conductance mechanosensitive channel protein MscL [Str...
| 701 | 4.3e-93 |
| WP_173531449.1 | large conductance mechanosensitive channel protein MscL [Str...
| 693 | 8.2e-92 |
| WP_189713215.1 | large conductance mechanosensitive channel protein MscL [Str...
| 692 | 9.8e-92 |
| WP_053760966.1 | MULTISPECIES: large conductance mechanosensitive channel pro...
| 688 | 5.3e-91 |
| WP_055522305.1 | large conductance mechanosensitive channel protein MscL [Str...
| 685 | 1.2e-90 |
| WP_215166178.1 | large conductance mechanosensitive channel protein MscL [Str...
| 684 | 1.7e-90 |
| WP_217550951.1 | large conductance mechanosensitive channel protein MscL [Str...
| 683 | 2.6e-90 |
| WP_055537718.1 | large conductance mechanosensitive channel protein MscL [Str...
| 680 | 6.7e-90 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3845 | Seems to have no N-terminal signal seq.
|