| ID | SAVERM_3696
| Type | CDS
|
| From | 4574562
| nt length | 762
|
| To | 4573801
| aa length | 253
|
| Gene |
| pI | 4.84
|
| Definition | hypothetical protein
| M.W (Da) | 27746
|
| Note | PF02900: catalytic LigB subunit of aromatic ring-opening dioxygenase
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3204 hypothetical protein | 450 | 2.0e-163
|
| sgr | SGR_4274 conserved hypothetical protein | 419 | 5.0e-151
|
| sam | SAM23877_3253 putative cytoplasmic protein | 446 | 2.0e-161
|
| scab | SCAB52881 hypothetical protein | 452 | 4.0e-164
|
| nfar | nfa43360 hypothetical protein | 357 | 7.3e-100
|
| ecoli | gi|16130935 putative enzyme with dioxygenase domain [Escherichia coli K12] | 159 | 1.3e-40
|
| paer | PA2839 [gene=PA2839] [prot=conserved hypothetical protein] [comment=PA2839] | 196 | 2.3e-51
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| LigB | 1 | Catalytic LigB subunit of aromatic ring-opening dioxygenase | 22-232 | 134.2 | 4e-39
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1734 | Seems to have no N-terminal signal seq.
|