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IDSAVERM_3752 TypeCDS
From4643474 nt length1653
To4641822 aa length550
Gene pI4.27
Definitionputative integrin-like protein M.W (Da)53921
NotePF01839: FG-GAP repeat AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FG-GAP4FG-GAP repeat104-139, 172-210, 234-255, 408-446145.82.3e-43

VCBS2Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella180-253, 299-35573.02e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030037890.1 FG-GAP-like repeat-containing protein [Streptomyces resistom... 18010.0e+00
WP_159485388.1 FG-GAP and VCBS repeat-containing protein [Streptomyces liba... 17910.0e+00
WP_198269695.1 VCBS repeat-containing protein [Streptomyces sabulosicollis]... 17750.0e+00
WP_018092804.1 MULTISPECIES: FG-GAP-like repeat-containing protein [unclass... 17570.0e+00
WP_109893778.1 FG-GAP and VCBS repeat-containing protein [Streptomyces sp. ... 17520.0e+00
WP_093645900.1 MULTISPECIES: FG-GAP and VCBS repeat-containing protein [unc... 17390.0e+00
WP_116512727.1 FG-GAP-like repeat-containing protein [Streptomyces sp. AcE2... 17340.0e+00
WP_030665589.1 VCBS repeat-containing protein [Streptomyces cellulosae] 17330.0e+00
WP_182313687.1 FG-GAP-like repeat-containing protein [Streptomyces sp. SCUT... 17150.0e+00
WP_187413218.1 FG-GAP-like repeat-containing protein [Streptomyces sp. WAC0... 17090.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.3654 Seems to have no N-terminal signal seq.