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IDSAVERM_3783 TypeCDS
From4678590 nt length858
To4679447 aa length285
Gene pI6.27
Definitionputative DNA-binding protein M.W (Da)32434
NotePF01381: Helix-turn-helix AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4441 putative DNA-binding protein5010.0e+00
sgrSGR_4257 putative DNA-binding protein5150.0e+00
samSAM23877_3287 Chitinase promoter binding protein 15110.0e+00
scabSCAB52291 putative DNA-binding protein5490.0e+00
saceSACE_1219 transcriptional regulator, XRE family2091.0e-67
paerPA3056 [gene=PA3056] [prot=hypothetical protein] [comment=PA3056]402.4e-04

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain13-7062.43.5e-17

HTH_31Helix-turn-helix18-6745.45.8e-12

HTH_191Helix-turn-helix domain15-6842.73.9e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_168492702.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13760.0e+00
WP_067372209.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13730.0e+00
WP_202498143.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 13710.0e+00
WP_028802748.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13700.0e+00
WP_054234375.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13680.0e+00
WP_212727253.1 helix-turn-helix domain-containing protein [Streptomyces mir... 13660.0e+00
WP_148008906.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13650.0e+00
WP_099922099.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13640.0e+00
WP_081217815.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13600.0e+00
WP_155056541.1 helix-turn-helix domain-containing protein [Streptomyces bla... 13580.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4833 Seems to have no N-terminal signal seq.