| ID | SAVERM_3895
| Type | CDS
|
| From | 4811322
| nt length | 438
|
| To | 4810885
| aa length | 145
|
| Gene |
| pI | 8.56
|
| Definition | putative MarR-family transcriptional regulator
| M.W (Da) | 16172
|
| Note | PF01047: MarR family
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4336 putative marR-family protein | 261 | 6.0e-92
|
| sgr | SGR_3163 putative MarR-family transcriptional regulator | 239 | 2.0e-83
|
| sam | SAM23877_3369 hypothetical protein | 265 | 2.0e-93
|
| scab | SCAB50981 putative MarR-family transcriptional regulator | 266 | 3.0e-94
|
| sace | SACE_0611 transcriptional regulator, MarR family | 96 | 4.0e-27
|
| nfar | nfa6490 transcriptional regulator | 105 | 1.6e-24
|
| mtub | gi|15608020 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY MARR-FAMILY) [Mycobacterium tuberculosis H37Rv] | 97 | 4.4e-22
|
| paer | PA3067 [gene=PA3067] [prot=probable transcriptional regulator] [comment=PA3067] | 66 | 8.4e-13
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MarR_2 | 1 | MarR family | 36-93 | 57.1 | 1.2e-15
|
| MarR | 1 | MarR family | 36-93 | 54.2 | 9.1e-15
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_055490481.1 | MarR family transcriptional regulator [Streptomyces sp. TP-A...
| 712 | 3.7e-95 |
| WP_059127055.1 | MULTISPECIES: MarR family transcriptional regulator [unclass...
| 711 | 5.6e-95 |
|
| 707 | 2.0e-94 |
| WP_234511155.1 | MarR family transcriptional regulator [Streptomyces glomerat...
| 707 | 2.1e-94 |
| WP_055708584.1 | MarR family transcriptional regulator [Streptomyces punicisc...
| 703 | 8.6e-94 |
| WP_055531761.1 | MarR family transcriptional regulator [Streptomyces graminil...
| 702 | 1.4e-93 |
| WP_165345211.1 | MarR family transcriptional regulator [Streptomyces ureilyti...
| 700 | 2.5e-93 |
| WP_094217179.1 | MULTISPECIES: MarR family transcriptional regulator [Strepto...
| 700 | 3.0e-93 |
| WP_073783519.1 | MULTISPECIES: MarR family transcriptional regulator [Strepto...
| 699 | 3.5e-93 |
| GGX63285.1 | MarR family transcriptional regulator [Streptomyces minutisclero...
| 700 | 3.7e-93 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2246 | Seems to have no N-terminal signal seq.
|