| ID | SAVERM_3911
| Type | CDS
|
| From | 4829509
| nt length | 2583
|
| To | 4832091
| aa length | 860
|
| Gene |
| pI | 6.09
|
| Definition | hypothetical protein
| M.W (Da) | 90116
|
| Note |
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4321 hypothetical protein | 1209 | 0.0e+00
|
| sgr | SGR_3184 conserved hypothetical protein | 1075 | 0.0e+00
|
| sam | SAM23877_3384 hypothetical protein | 1147 | 0.0e+00
|
| scab | SCAB50781 hypothetical protein | 1252 | 0.0e+00
|
| sace | SACE_0561 hypothetical protein | 441 | 7.0e-144
|
| nfar | nfa6350 hypothetical protein | 427 | 1.5e-120
|
| mtub | gi|15608002 hypothetical protein Rv0862c [Mycobacterium tuberculosis H37Rv] | 383 | 3.2e-107
|
| cglu | gi|19552044 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 254 | 9.1e-69
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Helicase_C_3 | 1 | Helicase conserved C-terminal domain | 566-688 | 146.2 | 5e-43
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189186193.1 | helicase C-terminal domain-containing protein [Streptomyces ...
| 2880 | 0.0e+00 |
| WP_190170813.1 | helicase C-terminal domain-containing protein [Streptomyces ...
| 2869 | 0.0e+00 |
| WP_234511105.1 | helicase C-terminal domain-containing protein [Streptomyces ...
| 2868 | 0.0e+00 |
| WP_181650901.1 | helicase C-terminal domain-containing protein [Streptomyces ...
| 2867 | 0.0e+00 |
| WP_217567483.1 | helicase-associated domain-containing protein [Streptomyces ...
| 2866 | 0.0e+00 |
| WP_097285228.1 | helicase C-terminal domain-containing protein [Streptomyces ...
| 2864 | 0.0e+00 |
| WP_212727226.1 | helicase-associated domain-containing protein [Streptomyces ...
| 2863 | 0.0e+00 |
| WP_143602090.1 | MULTISPECIES: helicase C-terminal domain-containing protein ...
| 2862 | 0.0e+00 |
| WP_168492888.1 | helicase C-terminal domain-containing protein [Streptomyces ...
| 2862 | 0.0e+00 |
| WP_097225526.1 | helicase C-terminal domain-containing protein [Streptomyces ...
| 2862 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2875 | Seems to have no N-terminal signal seq.
|