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IDSAVERM_4021 TypeCDS
From4943717 nt length879
To4942839 aa length292
Gene pI5.94
Definitionputative GntR-family transcriptional regulator M.W (Da)32701
NotePF00392: Bacterial regulatory proteins, gntR family AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4190 putative GntR-family transcriptional regulator4598.0e-166
samSAM23877_3503 putative GntR-family transcriptional regulator4541.0e-163
scabSCAB49751 putative GntR-family transcriptional regulator4771.0e-172

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GntR1Bacterial regulatory proteins, gntR family19-7367.36.2e-19

HTH_411Helix-turn-helix domain35-7629.44e-07

HTH_241Winged helix-turn-helix DNA-binding42-7025.09.5e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_095935198.1 winged helix-turn-helix domain-containing protein [Streptomy... 13530.0e+00
WP_099503662.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 13480.0e+00
WP_037766145.1 GntR family transcriptional regulator [Streptomyces sp. 142M... 13440.0e+00
WP_151485084.1 winged helix-turn-helix domain-containing protein [Streptomy... 13400.0e+00
WP_055490567.1 winged helix-turn-helix domain-containing protein [Streptomy... 13350.0e+00
WP_059126950.1 winged helix-turn-helix domain-containing protein [Streptomy... 13350.0e+00
WP_217453997.1 winged helix-turn-helix domain-containing protein [Streptomy... 13320.0e+00
WP_119100216.1 winged helix-turn-helix domain-containing protein [Streptomy... 13250.0e+00
WP_168528793.1 winged helix-turn-helix domain-containing protein [Streptomy... 13240.0e+00
WP_189836755.1 winged helix-turn-helix domain-containing protein [Streptomy... 13230.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4046 Seems to have no N-terminal signal seq.