| ID | SAVERM_4028
| Type | CDS
|
| From | 4950124
| nt length | 966
|
| To | 4949159
| aa length | 321
|
| Gene |
| pI | 5.99
|
| Definition | hypothetical protein
| M.W (Da) | 34846
|
| Note | PF01571: Glycine cleavage T-protein (aminomethyl transferase)
| AseI frg. | G1
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4181 conserved hypothetical protein | 550 | 0.0e+00
|
| sgr | SGR_3972 conserved hypothetical protein | 533 | 0.0e+00
|
| sam | SAM23877_3511 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress | 563 | 0.0e+00
|
| scab | SCAB49691 hypothetical protein | 566 | 0.0e+00
|
| sace | SACE_7113 glycine cleavage T protein (aminomethyl transferase) | 264 | 3.0e-87
|
| nfar | nfa5830 hypothetical protein | 236 | 1.5e-63
|
| mtub | gi|15607951 hypothetical protein Rv0811c [Mycobacterium tuberculosis H37Rv] | 214 | 6.2e-57
|
| cglu | gi|19553777 COG0354:Predicted aminomethyltransferase related to GcvT [Corynebacterium glutamicum] | 179 | 2.0e-46
|
| ecoli | gi|16130800 putative enzyme [Escherichia coli K12] | 41 | 9.3e-05
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GCV_T | 1 | Aminomethyltransferase folate-binding domain | 21-141 | 80.5 | 1.1e-22
|
| GCV_T_C | 1 | Glycine cleavage T-protein C-terminal barrel domain | 224-298 | 35.6 | 7.8e-09
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | Seems to have no N-terminal signal seq.
|