| ID | SAVERM_404
| Type | CDS
|
| From | 482912
| nt length | 1557
|
| To | 481356
| aa length | 518
|
| Gene | pntA
| pI | 5.64
|
| Definition | putative pyridine nucleotide transhydrogenase, alpha subunit
| M.W (Da) | 53305
|
| Note |
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of coenzymes & prosthetic groups
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO7623 pntA NAD(P) transhydrogenase alpha subunit | 778 | 0.0e+00
|
| scab | SCAB88451 putative pyridine nucleotide transhydrogenase, alpha subunit | 670 | 0.0e+00
|
| sace | SACE_5818 NAD(P) transhydrogenase subunit alpha | 299 | 3.0e-98
|
| nfar | nfa10130 pntAa pyridine nucleotide transhydrogenase alpha 1 subunit | 307 | 1.6e-84
|
| mtub | gi|15607297 PROBABLE NAD(P) TRANSHYDROGENASE (SUBUNIT ALPHA) PNTAA [FIRST PART; CATALYTIC PART] (PYRIDINE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT ALPHA) (NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT ALPHA) [Mycobacterium tuberculosis H37Rv] | 302 | 4.0e-83
|
| ecoli | gi|16129561 NAD(P) transhydrogenase subunit alpha [Escherichia coli K12] | 597 | 4.6e-172
|
| paer | PA0195 [gene=pntA] [prot=still frameshift pyridine nucleotide transhydrogenase alpha subunit] [comment=PA0195] | 372 | 5.7e-104
|
*coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AlaDh_PNT_C | 1 | Alanine dehydrogenase/PNT, C-terminal domain | 149-375 | 221.7 | 6.2e-66
|
| AlaDh_PNT_N | 1 | Alanine dehydrogenase/PNT, N-terminal domain | 15-145 | 157.2 | 2.6e-46
|
| PNTB_4TM | 1 | 4TM region of pyridine nucleotide transhydrogenase, mitoch | 435-517 | 112.6 | 8.2e-33
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_166631035.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha [Str...
| 2028 | 0.0e+00 |
| WP_058921118.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha [Str...
| 2024 | 0.0e+00 |
| WP_200699603.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha [Str...
| 2008 | 0.0e+00 |
| WP_161069693.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha [Str...
| 2003 | 0.0e+00 |
| WP_142145960.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha [Str...
| 2000 | 0.0e+00 |
| WP_150951530.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha [Str...
| 1984 | 0.0e+00 |
|
| 1978 | 0.0e+00 |
| WP_061928125.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha [Str...
| 1970 | 0.0e+00 |
| WP_069758026.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha [Str...
| 1969 | 0.0e+00 |
| WP_020121620.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha [Str...
| 1946 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4270 | Seems to have no N-terminal signal seq.
|