-- | --

IDSAVERM_4050 TypeCDS
From4970046 nt length834
To4969213 aa length277
Gene pI5.83
Definitionputative DNA-binding protein M.W (Da)31320
NotePF01381: Helix-turn-helix AseI frg.G1
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4176 conserved hypothetical protein1731.0e-53
sgrSGR_1602 putative DNA-binding protein1639.0e-50
samSAM23877_3528 DNA-binding protein3232.0e-112
scabSCAB52431 hypothetical protein1532.0e-45

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain15-6940.62.2e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497473.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13520.0e+00
WP_067020412.1 helix-turn-helix domain-containing protein [Streptomyces dys... 11597.2e-159
WP_037688303.1 helix-turn-helix domain-containing protein [Streptomyces sca... 11589.9e-159
WP_189876658.1 helix-turn-helix domain-containing protein [Streptomyces blu... 11501.6e-157
WP_165343066.1 helix-turn-helix domain-containing protein [Streptomyces ure... 11465.2e-157
WP_067005292.1 helix-turn-helix domain-containing protein [Streptomyces cel... 11412.9e-156
WP_030596097.1 helix-turn-helix domain-containing protein [Streptomyces ful... 11404.2e-156
WP_184985368.1 helix-turn-helix domain-containing protein [Streptomyces cae... 11352.6e-155
GGW77421.1 transcriptional regulator [Streptomyces caelestis] 11362.9e-155
WP_059418741.1 helix-turn-helix domain-containing protein [Streptomyces azu... 11335.8e-155

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4230 Seems to have no N-terminal signal seq.